RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 LYPD6Q86Y78 171 aa11.97□□□□□ -0.49
SHMT2-203ENST00000449049 FBXL14Q8N1E6 418 aa11.97□□□□□ -0.49
SHMT2-203ENST00000449049 CENPSQ8N2Z9 138 aa11.97□□□□□ -0.49
SHMT2-203ENST00000449049 DNAAF1Q8NEP3 725 aa11.97□□□□□ -0.49
SHMT2-203ENST00000449049 CHPT1Q8WUD6 406 aa11.97□□□□□ -0.49
SHMT2-203ENST00000449049 GTF3AQ92664 365 aaKnown RBP11.97□□□□□ -0.49
SHMT2-203ENST00000449049 NEURL2Q9BR09 285 aa11.97□□□□□ -0.49
SHMT2-203ENST00000449049 NOP16Q9Y3C1 178 aaKnown RBP11.97□□□□□ -0.49
SHMT2-203ENST00000449049 AK6Q9Y3D8 172 aaKnown RBP11.97□□□□□ -0.49
SHMT2-203ENST00000449049 USP9XQ93008 2570 aaPredicted RBP11.97□□□□□ -0.49
SHMT2-203ENST00000449049 A0A0G2JK05 382 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 H0YL77 283 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 ALDH3B1P43353 468 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 OR8G1Q15617 311 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 DDI2Q5TDH0 399 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 CDH26Q8IXH8 852 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 ZNF611Q8N823 705 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 OR52N4Q8NGI2 321 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 OR5A2Q8NGI9 324 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 DYNC2LI1Q8TCX1 351 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 NEK6Q9HC98 313 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 SLC7A11Q9UPY5 501 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 ANKHD1Q8IWZ3 2542 aaKnown RBP11.96□□□□□ -0.49
SHMT2-203ENST00000449049 FLNCQ14315 2725 aa11.96□□□□□ -0.49
SHMT2-203ENST00000449049 PQLC2LA1A4F0 135 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 OR5B21A6NL26 309 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 HCKP08631 526 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 ZNF81P51508 661 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 FUT6P51993 359 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 OR10A3P58181 314 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 CRIP3Q6Q6R5 217 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 LHFPL2Q6ZUX7 228 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 SPERTQ8NA61 448 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 OR8S1Q8NH09 359 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 TRMT10AQ8TBZ6 339 aaKnown RBP11.96□□□□□ -0.5
SHMT2-203ENST00000449049 NPRL2Q8WTW4 380 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 SLC25A46Q96AG3 418 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 HIST1H2AAQ96QV6 131 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 RTL8AQ9BWD3 113 aa11.96□□□□□ -0.5
SHMT2-203ENST00000449049 CADP27708 2225 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 SMIM30A4D0T7 59 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 M0R233 179 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 NCR1O76036 304 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 ADH4P08319 380 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 DANCRP0C864 163 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 COL8A1P27658 744 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 CFPP27918 469 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 THBS2P35442 1172 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 GLT8D1Q68CQ7 371 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 DTX2Q86UW9 622 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 ZNF295-AS1Q8N0V1 137 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 OR10AD1Q8NGE0 317 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 C14orf79Q96F83 325 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 BORCS8Q96FH0 119 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 MICU1Q9BPX6 476 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 CLEC4MQ9H2X3 399 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-203ENST00000449049 TPK1Q9H3S4 243 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 METTL17Q9H7H0 456 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-203ENST00000449049 CBLN4Q9NTU7 201 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 PLEKHB1Q9UF11 243 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-203ENST00000449049 ZDHHC8Q9ULC8 765 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 V9GY05 133 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 IGKV1-27A0A075B6S5 117 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-203ENST00000449049 FAM230AA0A1W2PPH8 454 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 NOTOA8MTQ0 251 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 NAT2P11245 290 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 RBP2P50120 134 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 CAV3P56539 151 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 KISS1Q15726 138 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 AGAP6Q5VW22 663 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 C11orf71Q6IPW1 123 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 RNF144BQ7Z419 303 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 OR2Z1Q8NG97 314 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 FOXRED1Q96CU9 486 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-203ENST00000449049 CPNE2Q96FN4 548 aaPredicted RBP11.95□□□□□ -0.5
SHMT2-203ENST00000449049 RNF170Q96K19 258 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 SPACA5Q96QH8 159 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 DIRC2Q96SL1 478 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 CXXC4Q9H2H0 198 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 UBTD1Q9HAC8 227 aa11.95□□□□□ -0.5
SHMT2-203ENST00000449049 SPTBN1Q01082 2364 aaKnown RBP11.94□□□□□ -0.5
SHMT2-203ENST00000449049 C17orf100A8MU93 164 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 ZNF732B4DXR9 585 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 IGHV1-46P01743 117 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 ZNF93P35789 620 aaPredicted RBP11.94□□□□□ -0.5
SHMT2-203ENST00000449049 CD200P41217 278 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 GPM6AP51674 278 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 BMXP51813 675 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 SNRPD2P62316 118 aaKnown RBP11.94□□□□□ -0.5
SHMT2-203ENST00000449049 GNG3P63215 75 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 HNRNPA0Q13151 305 aaKnown RBP11.94□□□□□ -0.5
SHMT2-203ENST00000449049 FAM76BQ5HYJ3 339 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 SFXN4Q6P4A7 337 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 WDR86Q86TI4 376 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 ELMOD3Q96FG2 381 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 UQCC2Q9BRT2 126 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 BARHL1Q9BZE3 327 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 PLEKHF2Q9H8W4 249 aa11.94□□□□□ -0.5
SHMT2-203ENST00000449049 CCDC59Q9P031 241 aaKnown RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms