RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 TMEM165Q9HC07 324 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 OR5V1Q9UGF6 321 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 LRCH1Q9Y2L9 728 aa12.19□□□□□ -0.46
USP39-206ENST00000448971 RPL36Q9Y3U8 105 aaKnown RBP12.19□□□□□ -0.46
USP39-206ENST00000448971 LOC107986453A0A1B0GWG9 222 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 OOEPA6NGQ2 149 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 F5H0A9 414 aaPredicted RBP12.18□□□□□ -0.46
USP39-206ENST00000448971 H0YHG0 523 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 LGALS8O00214 317 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 SYT7O43581 403 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 VENTXO95231 258 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 UBCP0CG48 685 aaKnown RBP12.18□□□□□ -0.46
USP39-206ENST00000448971 GPM6AP51674 278 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 GNB2P62879 340 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 RAB40BQ12829 278 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 CDONQ4KMG0 1287 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 ZBTB37Q5TC79 503 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 C12orf54Q6X4T0 127 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 DCDC5Q6ZRR9 648 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 MOB3CQ70IA8 216 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 GCSAMQ8N6F7 178 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 CNIH3Q8TBE1 160 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 ITFG2Q969R8 447 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 NEIL1Q96FI4 390 aaPredicted RBP12.18□□□□□ -0.46
USP39-206ENST00000448971 C4orf36Q96KX1 117 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 SSBP3Q9BWW4 388 aaPredicted RBP12.18□□□□□ -0.46
USP39-206ENST00000448971 METTL17Q9H7H0 456 aaPredicted RBP12.18□□□□□ -0.46
USP39-206ENST00000448971 RNPEPL1Q9HAU8 725 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 TRIM36Q9NQ86 728 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 MIOXQ9UGB7 285 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 EXOGQ9Y2C4 368 aaKnown RBP12.18□□□□□ -0.46
USP39-206ENST00000448971 WNK2Q9Y3S1 2297 aa12.18□□□□□ -0.46
USP39-206ENST00000448971 TRAV38-1A0A0B4J264 116 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 J3QLW9 94 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 J3QRE1 110 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 CDIPTO14735 213 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 SPRY1O43609 319 aaPredicted RBP12.17□□□□□ -0.46
USP39-206ENST00000448971 FSTL3O95633 263 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 HTR1AP08908 422 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 ZNF19P17023 458 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 EGR1P18146 543 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 PITPNBP48739 271 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 OR12D2P58182 307 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 GMFBP60983 142 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 ISL1P61371 349 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 IL18R1Q13478 541 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 SMN1Q16637 294 aaKnown RBP12.17□□□□□ -0.46
USP39-206ENST00000448971 DMRTC1Q5HYR2 192 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 CLVS2Q5SYC1 327 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 WDR82Q6UXN9 313 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 LIAT1Q6ZQX7 453 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 RPL3LQ92901 407 aaKnown RBP12.17□□□□□ -0.46
USP39-206ENST00000448971 INPP5EQ9NRR6 644 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 GPR173Q9NS66 373 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 MYRFQ9Y2G1 1151 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 V9GYS6 101 aa12.17□□□□□ -0.46
USP39-206ENST00000448971 IGHV3OR15-7A0A075B7D8 119 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 A0A0A6YYJ9 748 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 A0A1B0GTI1 187 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 A6NIN4 97 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 OR5B21A6NL26 309 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 DHRS7CA6NNS2 312 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 A8MXK9 166 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 ZNF732B4DXR9 585 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 WBP4O75554 376 aaKnown RBP12.16□□□□□ -0.46
USP39-206ENST00000448971 NRASP01111 189 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 IGHA1P01876 353 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 CCL1P22362 96 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 ZFP36P26651 326 aaKnown RBP12.16□□□□□ -0.46
USP39-206ENST00000448971 CAPGP40121 348 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 KIR3DL2P43630 455 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 GNG3P63215 75 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 SLC34A1Q06495 639 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 GALEQ14376 348 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 CEACAM21Q3KPI0 293 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 KLHL22Q53GT1 634 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 KCTD20Q7Z5Y7 419 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 LHFPL3Q86UP9 236 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 C8orf59Q8N0T1 100 aaPredicted RBP12.16□□□□□ -0.46
USP39-206ENST00000448971 PRSS35Q8N3Z0 413 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 OR52I1Q8NGK6 324 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 OR14K1Q8NGZ2 314 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 ZFAND2BQ8WV99 257 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 TECTBQ96PL2 329 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 FGF23Q9GZV9 251 aaPredicted RBP12.16□□□□□ -0.46
USP39-206ENST00000448971 TLNRD1Q9H1K6 362 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 DNAJB11Q9UBS4 358 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 CLN8Q9UBY8 286 aa12.16□□□□□ -0.46
USP39-206ENST00000448971 IRGMA1A4Y4 181 aa12.15□□□□□ -0.46
USP39-206ENST00000448971 ANKRD61A6NGH8 418 aa12.15□□□□□ -0.46
USP39-206ENST00000448971 J3QLI3 93 aa12.15□□□□□ -0.46
USP39-206ENST00000448971 ADAM20O43506 726 aa12.15□□□□□ -0.46
USP39-206ENST00000448971 GYPAP02724 150 aa12.15□□□□□ -0.46
USP39-206ENST00000448971 WNT2P09544 360 aa12.15□□□□□ -0.46
USP39-206ENST00000448971 GATA3P23771 443 aa12.15□□□□□ -0.46
USP39-206ENST00000448971 CPT2P23786 658 aa12.15□□□□□ -0.46
USP39-206ENST00000448971 COMPP49747 757 aaPredicted RBP12.15□□□□□ -0.46
USP39-206ENST00000448971 ADARB1P78563 741 aaKnown RBP12.15□□□□□ -0.46
USP39-206ENST00000448971 MICBQ29980 383 aa12.15□□□□□ -0.46
USP39-206ENST00000448971 LYPD2Q6UXB3 125 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms