RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 LAMP3Q9UQV4 416 aa9.52□□□□□ -0.88
LINC00342-202ENST00000448494 IGLV3-10A0A075B6K4 115 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 TRBV5-7A0A0A0MS05 114 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 SMIM35A0A1B0GVV1 85 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 A0A1W2PRS3 328 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 ANKRD66B4E2M5 251 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 NTN1O95631 604 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 CYC1P08574 325 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 PSG1P11464 419 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 CTRLP40313 264 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 FXYD6P3P58550 94 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 PAX2Q02962 417 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 SLC17A1Q14916 467 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 HOGA1Q86XE5 327 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 CISD2Q8N5K1 135 aaKnown RBP9.52□□□□□ -0.89
LINC00342-202ENST00000448494 STXBP6Q8NFX7 210 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 OR52L2PQ8NGH6 319 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 ASB11Q8WXH4 323 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 TMEM186Q96B77 213 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 RBMXL1Q96E39 390 aaKnown RBP9.52□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF479Q96JC4 524 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 SLC46A2Q9BY10 475 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 TTTY10Q9BZA0 68 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 INSL6Q9Y581 213 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 LIPGQ9Y5X9 500 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 LTBP3Q9NS15 1303 aa9.52□□□□□ -0.89
LINC00342-202ENST00000448494 HELZP42694 1942 aaKnown RBP9.52□□□□□ -0.89
LINC00342-202ENST00000448494 IGHV1-69-2A0A0G2JMI3 117 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 H3BNC9 293 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TRAPPC6AO75865 159 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 SEMA4FO95754 770 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 OR4Q2P0C623 313 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 MPC1LP0DKB6 136 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TCN2P20062 427 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 ACRV1P26436 265 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 BTN3A2P78410 334 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 CCL20P78556 96 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF92Q03936 586 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 NFATC4Q14934 902 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 SP5Q6BEB4 398 aaPredicted RBP9.51□□□□□ -0.89
LINC00342-202ENST00000448494 Q6ZN92 141 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 SLCO4C1Q6ZQN7 724 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF627Q7L945 461 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 NXPE1Q8N323 547 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 RHBDD1Q8TEB9 315 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TMEM37Q8WXS4 190 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 FAM3CQ92520 227 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 SLC41A2Q96JW4 573 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 SMIM14Q96QK8 99 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 ATP6V0BQ99437 205 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 Q9N2K0 584 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 SLC35D1Q9NTN3 355 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TMEM30AQ9NV96 361 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 KLHL28Q9NXS3 571 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF581Q9P0T4 197 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 HSPB2A8KAH6 182 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 SLC17A2O00624 439 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TBX19O60806 448 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 RAMP3O60896 148 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 B4GALT2O60909 372 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 B3GAT3O94766 335 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 MAS1P04201 325 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TYMSP04818 313 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 NID1P14543 1247 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 MPLP40238 635 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 FRKP42685 505 aaPredicted RBP9.51□□□□□ -0.89
LINC00342-202ENST00000448494 HMGCS2P54868 508 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 MANFP55145 182 aaKnown RBP9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TPPP2P59282 170 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 ARF5P84085 180 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TGM3Q08188 693 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 HSPB2Q16082 182 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TMEM41BQ5BJD5 291 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 C9orf50Q5SZB4 431 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 GDF7Q7Z4P5 450 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 SGPP2Q8IWX5 399 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TMEM156Q8N614 296 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 FAM222BQ8WU58 562 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 IL22RA2Q969J5 263 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 CCDC74AQ96AQ1 378 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 FGGYQ96C11 551 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 PCED1BQ96HM7 432 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 SDF2L1Q9HCN8 221 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 PRM3Q9NNZ6 103 aa9.51□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
LINC00342-202ENST00000448494 KIF26AQ9ULI4 1882 aaPredicted RBP9.51□□□□□ -0.89
LINC00342-202ENST00000448494 TRBV5-4A0A0C4DH59 114 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 FAM166BA8MTA8 275 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 G3V4G9 280 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 IFNL4K9M1U5 179 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 ZNF217O75362 1048 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 EFEMP2O95967 443 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 SMIM10L2AP0DMW4 78 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 SMIM10L2BP0DMW5 78 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 RAB38P57729 211 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 NANOS3P60323 173 aaKnown RBP9.5□□□□□ -0.89
LINC00342-202ENST00000448494 FKBP1AP62942 108 aaKnown RBP9.5□□□□□ -0.89
LINC00342-202ENST00000448494 ZFP36L1Q07352 338 aaKnown RBP9.5□□□□□ -0.89
LINC00342-202ENST00000448494 MPV17LQ2QL34 196 aa9.5□□□□□ -0.89
LINC00342-202ENST00000448494 TCEAL5Q5H9L2 206 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms