RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 NPIPB4C9JG80 1138 aa11.36□□□□□ -0.59
SHC1-210ENST00000448116 BCAT2O15382 392 aaPredicted RBP11.36□□□□□ -0.59
SHC1-210ENST00000448116 TLX3O43711 291 aaPredicted RBP11.36□□□□□ -0.59
SHC1-210ENST00000448116 SCGB1D2O95969 90 aa11.36□□□□□ -0.59
SHC1-210ENST00000448116 GSK3AP49840 483 aa11.36□□□□□ -0.59
SHC1-210ENST00000448116 SUPT4H1P63272 117 aaKnown RBP11.36□□□□□ -0.59
SHC1-210ENST00000448116 AARDQ4LEZ3 155 aa11.36□□□□□ -0.59
SHC1-210ENST00000448116 PABPC1L2AQ5JQF8 200 aa11.36□□□□□ -0.59
SHC1-210ENST00000448116 ZNF529Q6P280 563 aa11.36□□□□□ -0.59
SHC1-210ENST00000448116 UQCC3Q6UW78 93 aa11.36□□□□□ -0.59
SHC1-210ENST00000448116 CPEB2Q7Z5Q1 589 aaKnown RBP11.36□□□□□ -0.59
SHC1-210ENST00000448116 OXGR1Q96P68 337 aa11.36□□□□□ -0.59
SHC1-210ENST00000448116 MOB1AQ9H8S9 216 aa11.36□□□□□ -0.59
SHC1-210ENST00000448116 SIGLEC6O43699 453 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 LRP3O75074 770 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 GLI4P10075 376 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 SRFP11831 508 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 PTGFRP43088 359 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 DCDP81605 110 aaKnown RBP11.35□□□□□ -0.59
SHC1-210ENST00000448116 VAX1Q5SQQ9 334 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 RPL7L1Q6DKI1 246 aaKnown RBP11.35□□□□□ -0.59
SHC1-210ENST00000448116 SLC25A47Q6Q0C1 308 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 ZNF574Q6ZN55 896 aaPredicted RBP11.35□□□□□ -0.59
SHC1-210ENST00000448116 CFAP54Q96N23 3096 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 ZNF576Q9H609 170 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 RAB18Q9NP72 206 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 A0A1W2PNV4 684 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 MFNGO00587 321 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 RCC1P18754 421 aaPredicted RBP11.35□□□□□ -0.59
SHC1-210ENST00000448116 FPR2P25090 351 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 ACTBL2Q562R1 376 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 PRSS54Q6PEW0 395 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 C6orf201Q7Z4U5 140 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 SLC30A7Q8NEW0 376 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 CADM4Q8NFZ8 388 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 C2orf50Q96LR7 162 aa11.35□□□□□ -0.59
SHC1-210ENST00000448116 WDR77Q9BQA1 342 aaPredicted RBP11.35□□□□□ -0.59
SHC1-210ENST00000448116 HDHD3Q9BSH5 251 aaPredicted RBP11.35□□□□□ -0.59
SHC1-210ENST00000448116 C14orf166Q9Y224 244 aaKnown RBP11.35□□□□□ -0.59
SHC1-210ENST00000448116 FGF16O43320 207 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 DBHP09172 617 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 MSX1P28360 303 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 IAH1Q2TAA2 248 aaPredicted RBP11.34□□□□□ -0.59
SHC1-210ENST00000448116 OR4A4PQ8NGN8 299 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 OR6X1Q8NH79 312 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 RIMS4Q9H426 269 aaPredicted RBP11.34□□□□□ -0.59
SHC1-210ENST00000448116 RARRES3Q9UL19 164 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 NCOA6Q14686 2063 aaPredicted RBP11.34□□□□□ -0.59
SHC1-210ENST00000448116 F8VVB4 439 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 F8VWA3 439 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 SGCEO43556 437 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 MED6O75586 246 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 LY86O95711 162 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 TMEM225BP0DP42 221 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 RBMXP38159 391 aaKnown RBP11.34□□□□□ -0.59
SHC1-210ENST00000448116 NPBWR1P48145 328 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 CLEC9AQ6UXN8 241 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 PEG10Q86TG7 708 aaKnown RBP11.34□□□□□ -0.59
SHC1-210ENST00000448116 OR2M3Q8NG83 312 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 OR14K1Q8NGZ2 314 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 STOML3Q8TAV4 291 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 PLEKHJ1Q9NW61 149 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 FBLN5Q9UBX5 448 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 PIGLQ9Y2B2 252 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 LSM5Q9Y4Y9 91 aaKnown RBP11.34□□□□□ -0.59
SHC1-210ENST00000448116 A0A1B0GWJ7 208 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 CLN5O75503 358 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 HPNP05981 417 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 CELA2AP08217 269 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 PTGDSP41222 190 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 CSNK1A1P48729 337 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 P2RY4P51582 365 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 AFF3P51826 1226 aaKnown RBP11.34□□□□□ -0.59
SHC1-210ENST00000448116 PNLIPRP3Q17RR3 467 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 AADACL3Q5VUY0 350 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 OR5T2Q8NGG2 359 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 NECAB3Q96P71 396 aaPredicted RBP11.34□□□□□ -0.59
SHC1-210ENST00000448116 OCSTAMPQ9BR26 566 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 SLC26A1Q9H2B4 701 aa11.34□□□□□ -0.59
SHC1-210ENST00000448116 ANGPTL7O43827 346 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 NFYBP25208 207 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 FLI1Q01543 452 aaPredicted RBP11.33□□□□□ -0.6
SHC1-210ENST00000448116 UBE2V2Q15819 145 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 GUSBP11Q6P575 273 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 Q7L0L9 218 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 RABEPKQ7Z6M1 372 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 CARFQ8N187 725 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 TOMM40LQ969M1 308 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 RASL10BQ96S79 203 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 ZNF2Q9BSG1 426 aaPredicted RBP11.33□□□□□ -0.6
SHC1-210ENST00000448116 PECRQ9BY49 303 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 TGIF2Q9GZN2 237 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 PNRC2Q9NPJ4 139 aaKnown RBP11.33□□□□□ -0.6
SHC1-210ENST00000448116 PRELID3BQ9Y3B1 194 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 IGKV1D-8A0A087WSZ0 117 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 GDF9O60383 454 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 ID4P47928 161 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 S100A12P80511 92 aa11.33□□□□□ -0.6
SHC1-210ENST00000448116 RAET1LQ5VY80 246 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms