RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 TMEM246Q9BRR3 403 aa20.07■□□□□ 0.8
C9orf3-207ENST00000445181 FRRS1LQ9P0K9 344 aa20.07■□□□□ 0.8
C9orf3-207ENST00000445181 COL6A5A8TX70 2615 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 TRAV20A0A0B4J274 112 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 LOC107986453A0A1B0GWG9 222 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 DHRS7CA6NNS2 312 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 ZNF732B4DXR9 585 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 C3orf80F5H4A9 247 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 H0YJX3 145 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 RPS2P15880 293 aaKnown RBP20.06■□□□□ 0.8
C9orf3-207ENST00000445181 MYL12AP19105 171 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 PCMT1P22061 227 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 DCKP27707 260 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 NANOS3P60323 173 aaKnown RBP20.06■□□□□ 0.8
C9orf3-207ENST00000445181 GNG3P63215 75 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 KCNJ8Q15842 424 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 TMEM244Q5VVB8 128 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 KRT74Q7RTS7 529 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 C11orf53Q8IXP5 236 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 RDH10Q8IZV5 341 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 CCDC54Q8NEL0 328 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 LRRC29Q8WV35 223 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 RPL3LQ92901 407 aaKnown RBP20.06■□□□□ 0.8
C9orf3-207ENST00000445181 RNF166Q96A37 237 aaPredicted RBP20.06■□□□□ 0.8
C9orf3-207ENST00000445181 METTL17Q9H7H0 456 aaPredicted RBP20.06■□□□□ 0.8
C9orf3-207ENST00000445181 GPR173Q9NS66 373 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 MIOXQ9UGB7 285 aa20.06■□□□□ 0.8
C9orf3-207ENST00000445181 LGALS8O00214 317 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 PHF1O43189 567 aaPredicted RBP20.05■□□□□ 0.8
C9orf3-207ENST00000445181 FSTL3O95633 263 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 ZNF12P17014 697 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 GBX2P52951 348 aaPredicted RBP20.05■□□□□ 0.8
C9orf3-207ENST00000445181 LCN2P80188 198 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 FDX2Q6P4F2 183 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 WDR82Q6UXN9 313 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 EGFL6Q8IUX8 553 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 GCSAMQ8N6F7 178 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 OR5A2Q8NGI9 324 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 TMEM158Q8WZ71 300 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 JAM3Q9BX67 310 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 FGF23Q9GZV9 251 aaPredicted RBP20.05■□□□□ 0.8
C9orf3-207ENST00000445181 TLNRD1Q9H1K6 362 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 TRIM36Q9NQ86 728 aa20.05■□□□□ 0.8
C9orf3-207ENST00000445181 CHCHD3Q9NX63 227 aaKnown RBP20.05■□□□□ 0.8
C9orf3-207ENST00000445181 MXRA5Q9NR99 2828 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 TRAV38-1A0A0B4J264 116 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 OOEPA6NGQ2 149 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 OR5B21A6NL26 309 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 LIMS3P0CW19 117 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 LIMS4P0CW20 117 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 ETV1P50549 477 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 CCR9P51686 369 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 MRPL28Q13084 256 aaKnown RBP20.04■□□□□ 0.8
C9orf3-207ENST00000445181 MED21Q13503 144 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 ALKBH1Q13686 389 aaKnown RBP20.04■□□□□ 0.8
C9orf3-207ENST00000445181 ESCO2Q56NI9 601 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 TMPRSS11AQ6ZMR5 421 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 DCDC5Q6ZRR9 648 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 Q6ZSR3 168 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 NLRC3Q7RTR2 1065 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 ZNF676Q8N7Q3 588 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 SCCPDHQ8NBX0 429 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 TMEM80Q96HE8 168 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 ZNF649Q9BS31 505 aa20.04■□□□□ 0.8
C9orf3-207ENST00000445181 DIMT1Q9UNQ2 313 aaKnown RBP20.04■□□□□ 0.8
C9orf3-207ENST00000445181 EXOSC1Q9Y3B2 195 aaKnown RBP20.04■□□□□ 0.8
C9orf3-207ENST00000445181 FOXH1O75593 365 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 ATP6V1G2O95670 118 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 GMFBP60983 142 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 SEC61A1P61619 476 aaKnown RBP20.03■□□□□ 0.8
C9orf3-207ENST00000445181 FAM76BQ5HYJ3 339 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 TMEM42Q69YG0 159 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 FAHD2BQ6P2I3 314 aaPredicted RBP20.03■□□□□ 0.8
C9orf3-207ENST00000445181 BPIFB6Q8NFQ5 453 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 OR8B3Q8NGG8 313 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 GGHQ92820 318 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 NEIL1Q96FI4 390 aaPredicted RBP20.03■□□□□ 0.8
C9orf3-207ENST00000445181 FAHD2AQ96GK7 314 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 OR8B2Q96RD0 313 aa20.03■□□□□ 0.8
C9orf3-207ENST00000445181 SVEP1Q4LDE5 3571 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 EFCAB10A6NFE3 127 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 ANKRD61A6NGH8 418 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 F5H0A9 414 aaPredicted RBP20.02■□□□□ 0.8
C9orf3-207ENST00000445181 XPNPEP2O43895 674 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 SERPINA3P01011 423 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 LHBP01229 141 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 ISG15P05161 165 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 WNT2P09544 360 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 EGR1P18146 543 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 CPT2P23786 658 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 HAVCR2Q8TDQ0 301 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 OR51I2Q9H344 312 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 SLC7A11Q9UPY5 501 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 LRCH1Q9Y2L9 728 aa20.02■□□□□ 0.8
C9orf3-207ENST00000445181 CAB39Q9Y376 341 aaPredicted RBP20.02■□□□□ 0.8
C9orf3-207ENST00000445181 IGHV3OR15-7A0A075B7D8 119 aa20.01■□□□□ 0.79
C9orf3-207ENST00000445181 A0A0G2JMP0 313 aa20.01■□□□□ 0.79
C9orf3-207ENST00000445181 A0A0X1KG70 313 aa20.01■□□□□ 0.79
C9orf3-207ENST00000445181 GATBO75879 557 aaKnown RBP20.01■□□□□ 0.79
C9orf3-207ENST00000445181 CCDC159P0C7I6 412 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms