RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 SSX2Q16385 188 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.85□□□□□ -0.99
CASP4-203ENST00000444739 RNASE11Q8TAA1 199 aaKnown RBP8.85□□□□□ -0.99
CASP4-203ENST00000444739 C2orf88Q9BSF0 95 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 PBOV1Q9GZY1 135 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 PRODH2Q9UF12 536 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 ATXN7L1Q9ULK2 861 aaPredicted RBP8.85□□□□□ -0.99
CASP4-203ENST00000444739 C14orf166Q9Y224 244 aaKnown RBP8.85□□□□□ -0.99
CASP4-203ENST00000444739 NSG2Q9Y328 171 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 A0A1B0GV50 99 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 OR5H15A6NDH6 313 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 OR5H1A6NKK0 313 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 TSTD3H0UI37 97 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 H3BQ15 152 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 HCRTR2O43614 444 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 SCGB1D2O95969 90 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 MBPP02686 304 aaPredicted RBP8.85□□□□□ -0.99
CASP4-203ENST00000444739 HLA-DOBP13765 273 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 SERPINA2P20848 420 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 ACY1Q03154 408 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 UBE2V2Q15819 145 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 PDZD11Q5EBL8 140 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 BEND4Q6ZU67 534 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 MFSD8Q8NHS3 518 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 PATE1Q8WXA2 126 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 JSRP1Q96MG2 331 aaPredicted RBP8.85□□□□□ -0.99
CASP4-203ENST00000444739 C5orf34Q96MH7 638 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 NXF5Q9H1B4 397 aaKnown RBP8.85□□□□□ -0.99
CASP4-203ENST00000444739 DUSP15Q9H1R2 295 aaPredicted RBP8.85□□□□□ -0.99
CASP4-203ENST00000444739 PRO1933Q9H354 126 aa8.85□□□□□ -0.99
CASP4-203ENST00000444739 IGKV1D-43A0A0B4J1Z2 117 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 LINC01553A4QN01 128 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 TLCD2A6NGC4 264 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 GPR137BO60478 399 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 IFNA21P01568 189 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 DHPSP49366 369 aaPredicted RBP8.84□□□□□ -0.99
CASP4-203ENST00000444739 LBHQ53QV2 105 aaPredicted RBP8.84□□□□□ -0.99
CASP4-203ENST00000444739 WDFY1Q8IWB7 410 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 ZNF321PQ8N8H1 164 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 APCDD1LQ8NCL9 501 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 GPBAR1Q8TDU6 330 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 ADOQ96SZ5 270 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 SSX3Q99909 188 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 NELFAQ9H3P2 528 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 HRASLS2Q9NWW9 162 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 CHD7Q9P2D1 2997 aa8.84□□□□□ -0.99
CASP4-203ENST00000444739 TGIF2-C20orf24A0A0A6YYL0 155 aa8.83□□□□□ -1
CASP4-203ENST00000444739 CRYM-AS1A6NIL9 109 aa8.83□□□□□ -1
CASP4-203ENST00000444739 FOXI3A8MTJ6 420 aaPredicted RBP8.83□□□□□ -1
CASP4-203ENST00000444739 H0Y8X5 98 aa8.83□□□□□ -1
CASP4-203ENST00000444739 HSD17B6O14756 317 aa8.83□□□□□ -1
CASP4-203ENST00000444739 CRTAPO75718 401 aaPredicted RBP8.83□□□□□ -1
CASP4-203ENST00000444739 PTBP3O95758 552 aaKnown RBP8.83□□□□□ -1
CASP4-203ENST00000444739 TRGC2P03986 189 aa8.83□□□□□ -1
CASP4-203ENST00000444739 HEXBP07686 556 aa8.83□□□□□ -1
CASP4-203ENST00000444739 ZNF20P17024 532 aa8.83□□□□□ -1
CASP4-203ENST00000444739 TAGLN2P37802 199 aaKnown RBP8.83□□□□□ -1
CASP4-203ENST00000444739 NKX6-1P78426 367 aaPredicted RBP8.83□□□□□ -1
CASP4-203ENST00000444739 CCL20P78556 96 aa8.83□□□□□ -1
CASP4-203ENST00000444739 GPM6BQ13491 265 aa8.83□□□□□ -1
CASP4-203ENST00000444739 NFATC4Q14934 902 aa8.83□□□□□ -1
CASP4-203ENST00000444739 HAGHQ16775 308 aa8.83□□□□□ -1
CASP4-203ENST00000444739 GPR157Q5UAW9 335 aa8.83□□□□□ -1
CASP4-203ENST00000444739 PLXDC2Q6UX71 529 aa8.83□□□□□ -1
CASP4-203ENST00000444739 GALNTL5Q7Z4T8 443 aa8.83□□□□□ -1
CASP4-203ENST00000444739 SGPP2Q8IWX5 399 aa8.83□□□□□ -1
CASP4-203ENST00000444739 FAM89BQ8N5H3 189 aa8.83□□□□□ -1
CASP4-203ENST00000444739 HSD17B11Q8NBQ5 300 aa8.83□□□□□ -1
CASP4-203ENST00000444739 OR10AD1Q8NGE0 317 aa8.83□□□□□ -1
CASP4-203ENST00000444739 OR13D1Q8NGV5 346 aa8.83□□□□□ -1
CASP4-203ENST00000444739 FAM213BQ8TBF2 198 aa8.83□□□□□ -1
CASP4-203ENST00000444739 SLAMF6Q96DU3 332 aa8.83□□□□□ -1
CASP4-203ENST00000444739 MISP3Q96FF7 219 aa8.83□□□□□ -1
CASP4-203ENST00000444739 NEU1Q99519 415 aa8.83□□□□□ -1
CASP4-203ENST00000444739 TGIF2Q9GZN2 237 aa8.83□□□□□ -1
CASP4-203ENST00000444739 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.83□□□□□ -1
CASP4-203ENST00000444739 DCAF16Q9NXF7 216 aa8.83□□□□□ -1
CASP4-203ENST00000444739 CA14Q9ULX7 337 aa8.83□□□□□ -1
CASP4-203ENST00000444739 TMED7-TICAM2A0A0A6YYA0 188 aa8.83□□□□□ -1
CASP4-203ENST00000444739 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.83□□□□□ -1
CASP4-203ENST00000444739 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.83□□□□□ -1
CASP4-203ENST00000444739 RBFOX3A6NFN3 312 aa8.83□□□□□ -1
CASP4-203ENST00000444739 MKRN2OSH3BPM6 223 aa8.83□□□□□ -1
CASP4-203ENST00000444739 CLDN4O14493 209 aa8.83□□□□□ -1
CASP4-203ENST00000444739 NSA2O95478 260 aaKnown RBP8.83□□□□□ -1
CASP4-203ENST00000444739 CTSDP07339 412 aaPredicted RBP8.83□□□□□ -1
CASP4-203ENST00000444739 GP1BBP13224 206 aa8.83□□□□□ -1
CASP4-203ENST00000444739 FABP4P15090 132 aa8.83□□□□□ -1
CASP4-203ENST00000444739 KLK2P20151 261 aa8.83□□□□□ -1
CASP4-203ENST00000444739 AFF3P51826 1226 aaKnown RBP8.83□□□□□ -1
CASP4-203ENST00000444739 SLC37A1P57057 533 aa8.83□□□□□ -1
CASP4-203ENST00000444739 UBE2KP61086 200 aa8.83□□□□□ -1
CASP4-203ENST00000444739 PRTGQ2VWP7 1150 aa8.83□□□□□ -1
CASP4-203ENST00000444739 HIST2H3PS2Q5TEC6 136 aa8.83□□□□□ -1
CASP4-203ENST00000444739 ZNF776Q68DI1 518 aaPredicted RBP8.83□□□□□ -1
CASP4-203ENST00000444739 DNM1P34Q6PK57 102 aa8.83□□□□□ -1
CASP4-203ENST00000444739 KLHL24Q6TFL4 600 aa8.83□□□□□ -1
CASP4-203ENST00000444739 TMEM182Q6ZP80 229 aaPredicted RBP8.83□□□□□ -1
CASP4-203ENST00000444739 PRR22Q8IZ63 422 aa8.83□□□□□ -1
CASP4-203ENST00000444739 OR10S1Q8NGN2 331 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms