RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 SH3BGRL3Q9H299 93 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 MRPS23Q9Y3D9 190 aaKnown RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 AHDC1Q5TGY3 1603 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 ERVFC1-1P60608 527 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 CCL20P78556 96 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ZNF343Q6P1L6 599 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ZNF664Q8N3J9 261 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 OR4N2Q8NGD1 307 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 FAM174AQ8TBP5 190 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 TRGC1P0CF51 173 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ENDOGQ14249 297 aaKnown RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 ZNF141Q15928 474 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 RTL6Q6ICC9 239 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 GRASPQ7Z6J2 395 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 NICN1Q9BSH3 213 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 TCRBV21S2A2A0A5A6 115 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ZNF658BQ4V348 819 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 C11orf42Q8N5U0 333 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 OR9A4Q8NGU2 314 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 PPP1R14AQ96A00 147 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 GPX7Q96SL4 187 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 WDR81Q562E7 1941 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 CLDN34H7C241 214 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 FSTP19883 344 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 CST5P28325 142 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 TMEM241Q24JQ0 296 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 MVB12AQ96EY5 273 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ELOVL1Q9BW60 279 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 GAL3ST2Q9H3Q3 398 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 SRPK3Q9UPE1 567 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 HIF3AQ9Y2N7 669 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 C2CD3Q4AC94 2353 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 PHIPQ8WWQ0 1821 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 TRAV36DV7A0A075B6V5 113 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 A0A1W2PPQ1 181 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 C4orf47A7E2U8 309 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 FAM157AC9JC47 383 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 FGF17O60258 216 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 CTSDP07339 412 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 P2RY1P47900 373 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 GAGE1Q13065 139 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ARSJQ5FYB0 599 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 FIGLAQ6QHK4 219 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ZNRF4Q8WWF5 429 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 MRGPRX3Q96LB0 322 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ZNF2Q9BSG1 426 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 S1PR5Q9H228 398 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 POLR2AP24928 1970 aaKnown RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 MSTNO14793 375 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 HLA-HP01893 362 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 GZMBP10144 247 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 MTCP1P56278 107 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 HSD11B2P80365 405 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 FAM57BQ71RH2 274 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 OR1P1Q8NH06 330 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 SPACA7Q96KW9 195 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 C5orf34Q96MH7 638 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 OR51I2Q9H344 312 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 BTG2P78543 158 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 HERPUD1Q15011 391 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 ASTLQ6HA08 431 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 KCNIP4Q6PIL6 250 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 LSRQ86X29 649 aaPredicted RBP4.47□□□□□ -1.69
HERC1-201ENST00000443617 BAGE3Q86Y29 109 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 BAGE2Q86Y30 109 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 TSPAN32Q96QS1 320 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 SPIN2AQ99865 258 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 SPIN2BQ9BPZ2 258 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 AICDAQ9GZX7 198 aa4.47□□□□□ -1.69
HERC1-201ENST00000443617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.47□□□□□ -1.691e-6■■■■□ 23.8
HERC1-201ENST00000443617 ANKUB1A6NFN9 424 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 CEBPZOSA8MTT3 80 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 GPR89AB7ZAQ6 455 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 GPR89BP0CG08 455 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 RPL29P47914 159 aaKnown RBP4.46□□□□□ -1.69
HERC1-201ENST00000443617 RPP30P78346 268 aaKnown RBP4.46□□□□□ -1.69
HERC1-201ENST00000443617 CST9LP1Q5W188 147 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 SIGLECL1Q8N7X8 197 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 OR10G4Q8NGN3 311 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 MIEN1Q9BRT3 115 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 SAMD10Q9BYL1 202 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 MAGT1Q9H0U3 335 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 SMOC1Q9H4F8 434 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 PNO1Q9NRX1 252 aaKnown RBP4.46□□□□□ -1.69
HERC1-201ENST00000443617 A8MVM7 634 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 EREGO14944 169 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 HNF1AP20823 631 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 PIGPP57054 158 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 ZNF506Q5JVG8 444 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 ABLIM2Q6H8Q1 611 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 HDAC8Q9BY41 377 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 GPR132Q9UNW8 380 aa4.46□□□□□ -1.69
HERC1-201ENST00000443617 APBB3O95704 486 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 ZP2Q05996 745 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 NNATQ16517 81 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 SP6Q3SY56 376 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 VITQ6UXI7 678 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 NECAP1Q8NC96 275 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 PRSS50Q9UI38 385 aa4.46□□□□□ -1.7
HERC1-201ENST00000443617 RBBP6Q7Z6E9 1792 aaKnown RBP4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms