RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 ZANQ9Y493 2812 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 F8P00451 2351 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 PPIAL4EA0A075B759 164 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 hCG_1807616A0A1W2PRN6 198 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 ANKRD61A6NGH8 418 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 PPIAL4DF5H284 164 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 CDIPTO14735 213 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 MYL12BO14950 172 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 OGG1O15527 345 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 DENRO43583 198 aaKnown RBP10.36□□□□□ -0.75
USP1-203ENST00000442679 LALBAP00709 142 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 SERPINA3P01011 423 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 HEXAP06865 529 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 PPIAL4FP0DN26 164 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 IGHV4-31P0DP07 118 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 ZNF20P17024 532 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 MDH2P40926 338 aaKnown RBP10.36□□□□□ -0.75
USP1-203ENST00000442679 GZMKP49863 264 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 GNG3P63215 75 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 SLC35A2P78381 396 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 KRTAP1-1Q07627 177 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 ZNF154Q13106 437 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 CDK5R1Q15078 307 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 FAM76BQ5HYJ3 339 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 RBM48Q5RL73 367 aaKnown RBP10.36□□□□□ -0.75
USP1-203ENST00000442679 FAM201AQ5SY85 155 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 RNLSQ5VYX0 342 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 XAF1Q6GPH4 301 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 Q71RC1 249 aaPredicted RBP10.36□□□□□ -0.75
USP1-203ENST00000442679 NANOGP1Q8N7R0 232 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 ZNF485Q8NCK3 441 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 OR51A4Q8NGJ6 313 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 OR13C3Q8NGS6 347 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 SGCDQ92629 289 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 RPL3LQ92901 407 aaKnown RBP10.36□□□□□ -0.75
USP1-203ENST00000442679 C10orf35Q96D05 121 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 GAL3ST1Q99999 423 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 PDCD1LG2Q9BQ51 273 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 CDCA4Q9BXL8 241 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 TLNRD1Q9H1K6 362 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 RASSF4Q9H2L5 321 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 DUSP21Q9H596 190 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 ZNF665Q9H7R5 613 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 TMEM165Q9HC07 324 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 TRIM36Q9NQ86 728 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 UBAP1Q9NZ09 502 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 PPIAL4AQ9Y536 164 aa10.36□□□□□ -0.75
USP1-203ENST00000442679 SIRT4Q9Y6E7 314 aaPredicted RBP10.36□□□□□ -0.75
USP1-203ENST00000442679 OR5B21A6NL26 309 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 RGS10O43665 173 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 CD5LO43866 347 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 GATBO75879 557 aaKnown RBP10.35□□□□□ -0.75
USP1-203ENST00000442679 CRHBPP24387 322 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 WNT4P56705 351 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 HOXA4Q00056 320 aaPredicted RBP10.35□□□□□ -0.75
USP1-203ENST00000442679 UBE2V2Q15819 145 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 TMEM155Q4W5P6 130 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 WDR82Q6UXN9 313 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 MUC20Q8N307 709 aaPredicted RBP10.35□□□□□ -0.75
USP1-203ENST00000442679 SPICQ8N5J4 248 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 SCCPDHQ8NBX0 429 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 C19orf18Q8NEA5 215 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 DEFB108BQ8NET1 73 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 LRRC29Q8WV35 223 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 PP6455Q8WZ26 134 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 MSI2Q96DH6 328 aaKnown RBP10.35□□□□□ -0.75
USP1-203ENST00000442679 ADAT3Q96EY9 351 aaPredicted RBP10.35□□□□□ -0.75
USP1-203ENST00000442679 MND1Q9BWT6 205 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 OR51I2Q9H344 312 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 METTL17Q9H7H0 456 aaPredicted RBP10.35□□□□□ -0.75
USP1-203ENST00000442679 PCDHB10Q9UN67 800 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 SLC7A11Q9UPY5 501 aa10.35□□□□□ -0.75
USP1-203ENST00000442679 CHD3Q12873 2000 aaKnown RBP10.34□□□□□ -0.75
USP1-203ENST00000442679 FAM230AA0A1W2PPH8 454 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 PQLC2LA1A4F0 135 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 FSTL3O95633 263 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 LHBP01229 141 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 IGHV2-5P01817 119 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 CD80P33681 288 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 FUT6P51993 359 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 DMKNQ6E0U4 476 aaPredicted RBP10.34□□□□□ -0.75
USP1-203ENST00000442679 SFRP4Q6FHJ7 346 aaPredicted RBP10.34□□□□□ -0.75
USP1-203ENST00000442679 ZNF573Q86YE8 665 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 GCSAMQ8N6F7 178 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 ZFP41Q8N8Y5 198 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 LINC01356Q8N9X3 169 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 RPS4Y2Q8TD47 263 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 NPRL2Q8WTW4 380 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 TSEN15Q8WW01 171 aaKnown RBP10.34□□□□□ -0.75
USP1-203ENST00000442679 RAB39BQ96DA2 213 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 SMIM19Q96E16 107 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 C1orf159Q96HA4 380 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 TECTBQ96PL2 329 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 TMEM246Q9BRR3 403 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 CHST5Q9GZS9 411 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 CCDC90BQ9GZT6 254 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 YAE1D1Q9NRH1 226 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 DHDHQ9UQ10 334 aa10.34□□□□□ -0.75
USP1-203ENST00000442679 B4DSR2 109 aa10.33□□□□□ -0.76
USP1-203ENST00000442679 FAM157AC9JC47 383 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms