RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 MED27Q6P2C8 311 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 CD200R1LQ6Q8B3 271 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 FAM131AQ6UXB0 335 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 NOTCH2NLQ7Z3S9 236 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 FBXO16Q8IX29 292 aaPredicted RBP3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 CMTM1Q8IZ96 169 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 MTURNQ8N3F0 131 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR9Q1Q8NGQ5 310 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR2T6Q8NHC8 308 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ASB17Q8WXJ9 295 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 C12orf43Q96C57 262 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 NODALQ96S42 347 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 DOK1Q99704 481 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF670Q9BS34 389 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 BIN3Q9NQY0 253 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC2A6Q9UGQ3 507 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 UFC1Q9Y3C8 167 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ADGRA3Q8IWK6 1321 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 DHX57Q6P158 1386 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ARHGAP23Q9P227 1491 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 TIAM1Q13009 1591 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 KIF14Q15058 1648 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 IGHV4-30-2A0A087WSY4 118 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 A0A1W2PRD5 423 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 DCTN6O00399 190 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC31A1O15431 190 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 CXCL13O43927 109 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 HPGDSO60760 199 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SCO1O75880 301 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SEMA4FO95754 770 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 MMP1P03956 469 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 CTSLP07711 333 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 CST2P09228 141 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ACSM4P0C7M7 580 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SPI1P17947 270 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 PAX6P26367 422 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SPRP35270 261 aaPredicted RBP3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 GLP1RP43220 463 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC7A9P82251 487 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 PAX2Q02962 417 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 CD47Q08722 323 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC10A7Q0GE19 358 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 RNASE10Q5GAN6 216 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 REG3GQ6UW15 175 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 UNQ9370/PRO34162Q6UXP9 181 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SSX7Q7RTT5 188 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 OLIG3Q7RTU3 272 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC16A13Q7RTY0 426 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR2W3Q7Z3T1 314 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF547Q8IVP9 402 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 MS4A15Q8N5U1 240 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SLC26A10Q8NG04 563 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR2Z1Q8NG97 314 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 COQ8AQ8NI60 647 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 TRUB1Q8WWH5 349 aaKnown RBP3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 TAF15Q92804 592 aaKnown RBP eCLIP3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 TBX5Q99593 518 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ARHGDIGQ99819 225 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 TRIM51Q9BSJ1 452 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 TM2D1Q9BX74 207 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 BOLA2Q9H3K6 86 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 TPT1P8Q9HAU6 139 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 AMBNQ9NP70 447 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 ACP6Q9NPH0 428 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 GPATCH2LQ9NWQ4 482 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 EHFQ9NZC4 300 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 BFARQ9NZS9 450 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SNX24Q9Y343 169 aa3.29□□□□□ -1.88
CDC42BPA-207ENST00000441725 SPHKAPQ2M3C7 1700 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 IGHV3OR16-12A0A075B7B8 117 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 NSG1A0A0A6YYJ2 146 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 A0A1W2PRF3 423 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 A0A1W2PRM7 423 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 VPS37CA5D8V6 355 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 EFCAB9A8MZ26 197 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ANKRD63C9JTQ0 380 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 UGT2B11O75310 529 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 GJB5O95377 273 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 C1orf105O95561 183 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 TIMP1P01033 207 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 C1QCP02747 245 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ISG15P05161 165 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 BCHEP06276 602 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 HIST1H1EP10412 219 aaKnown RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OMGP23515 440 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 FGF9P31371 208 aaPredicted RBP3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 NSG1P42857 185 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 LGALS7P47929 136 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ATP4BP51164 291 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR1Q1Q15612 314 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 RNF212Q495C1 297 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ARIH2OSQ8N7S6 290 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ATP6V1C2Q8NEY4 427 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 OR5B3Q8NH48 314 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 FLVCR1-AS1Q8TAF5 88 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 RAB8BQ92930 207 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 TOMM40LQ969M1 308 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 ZNF488Q96MN9 340 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 Q96MT0 163 aa3.28□□□□□ -1.88
CDC42BPA-207ENST00000441725 PGLYRP2Q96PD5 576 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms