RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 NME3Q13232 169 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 LCTLQ6UWM7 567 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 GOLGA7Q7Z5G4 137 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF547Q8IVP9 402 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 D2HGDHQ8N465 521 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 OR5AU1Q8NGC0 362 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 SYNPRQ8TBG9 265 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 GPR119Q8TDV5 335 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 AURKBQ96GD4 344 aaPredicted RBP9.19□□□□□ -0.94
SYNE2-206ENST00000441438 OR11A1Q9GZK7 315 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 HSPB8Q9UJY1 196 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 LRRC30A6NM36 301 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 AMBPP02760 352 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 TMEM78Q5T7P6 136 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 UNQ6126/PRO20091Q6UXV3 157 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 Q6ZT83 130 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 RASSF6Q6ZTQ3 369 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.19□□□□□ -0.94
SYNE2-206ENST00000441438 LINC01465Q8N7H1 131 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 GPR32P1Q8NGA4 272 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 WNT2BQ93097 391 aa9.19□□□□□ -0.94
SYNE2-206ENST00000441438 PATZ1Q9HBE1 687 aaKnown RBP9.19□□□□□ -0.94
SYNE2-206ENST00000441438 A0A0B4J2E0 115 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 A0A1B0GX12 115 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 E9PLN8 166 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 KIR2DS3K7RE56 304 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 IGHG3P01860 377 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ADORA3P0DMS8 318 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 EFNB2P52799 333 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 KIR2DS3Q14952 304 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 PRSS8Q16651 343 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 VWA2Q5GFL6 755 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 CHMP1BQ7LBR1 199 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 OR2AJ1Q8NGZ0 328 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ATP5SQ99766 215 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 VKORC1Q9BQB6 163 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 GATA5Q9BWX5 397 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-206ENST00000441438 FNDC4Q9H6D8 234 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-206ENST00000441438 EXOSC1Q9Y3B2 195 aaKnown RBP9.18□□□□□ -0.94
SYNE2-206ENST00000441438 PRRC2BQ5JSZ5 2229 aaKnown RBP9.18□□□□□ -0.94
SYNE2-206ENST00000441438 TRBV4-1A0A0J9YWV2 114 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 SHISA3A0PJX4 238 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 STK16O75716 305 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF205O95201 554 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 OXTP01178 125 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ESR1P03372 595 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 FABP3P05413 133 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 PRDX3P30048 256 aaKnown RBP9.18□□□□□ -0.94
SYNE2-206ENST00000441438 HBA1P69905 142 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 OR2F1Q13607 317 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 HTR4Q13639 388 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ENPP6Q6UWR7 440 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 PRSS45Q7RTY3 260 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 DND1Q8IYX4 353 aaKnown RBP9.18□□□□□ -0.94
SYNE2-206ENST00000441438 H1FOOQ8IZA3 346 aaPredicted RBP9.18□□□□□ -0.94
SYNE2-206ENST00000441438 OR6C1Q96RD1 312 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 F2RL3Q96RI0 385 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 NODALQ96S42 347 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF670Q9BS34 389 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 SLC17A5Q9NRA2 495 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 LSM4Q9Y4Z0 139 aaKnown RBP9.18□□□□□ -0.94
SYNE2-206ENST00000441438 WSB1Q9Y6I7 421 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 UNC80Q8N2C7 3258 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 GLYATL1P3A0A0U1RQE8 302 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ARL5CA6NH57 179 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF726A6NNF4 738 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF587BE7ETH6 402 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 PLPP2O43688 288 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ORC5O43913 435 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 OR5H8P0DN80 308 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 OR13C7P0DN81 318 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 TDGF1P13385 188 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 RHOBP62745 196 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 PSG4Q00888 419 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF763Q0D2J5 394 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 PLCXD2Q0VAA5 305 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ZNF773Q6PK81 442 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 STRADAQ7RTN6 431 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 PPP1R32Q7Z5V6 425 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 PDZD9Q8IXQ8 264 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 OR4L1Q8NH43 312 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 OR14A16Q8NHC5 309 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 SCRN2Q96FV2 425 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 BTN2A3PQ96KV6 586 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 TP53RKQ96S44 253 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 GINS3Q9BRX5 216 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 FAAP24Q9BTP7 215 aa9.18□□□□□ -0.94
SYNE2-206ENST00000441438 ANK1P16157 1881 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 PTPRSQ13332 1948 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 A0A1B0GW55 424 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 XRCC3O43542 346 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 OR7C2O60412 319 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 DUX4L2P0CJ85 424 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 DUX4L3P0CJ86 424 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 DUX4L5P0CJ88 424 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 DUX4L6P0CJ89 424 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 DUX4L7P0CJ90 424 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 IRF1P10914 325 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 MNDAP41218 407 aa9.17□□□□□ -0.94
SYNE2-206ENST00000441438 AVPR1BP47901 424 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms