RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 LRRC29Q8WV35 223 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 RPL3LQ92901 407 aaKnown RBP15.11■□□□□ 0.01
CPSF4-205ENST00000440514 HIST1H2AAQ96QV6 131 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 JAM3Q9BX67 310 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 TLNRD1Q9H1K6 362 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 PLEKHA1Q9HB21 404 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 NF1P21359 2839 aa15.11■□□□□ 0.01
CPSF4-205ENST00000440514 C2CD3Q4AC94 2353 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 TMEM210A6NLX4 147 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 ZNF732B4DXR9 585 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 CDIPTO14735 213 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 PLPP2O43688 288 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 XPNPEP2O43895 674 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 NRASP01111 189 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 RPS2P15880 293 aaKnown RBP15.1■□□□□ 0.01
CPSF4-205ENST00000440514 MYL12AP19105 171 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 DVL1P1P54792 670 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-205ENST00000440514 CR1LQ2VPA4 569 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 CEACAM21Q3KPI0 293 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 CLVS2Q5SYC1 327 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 TMEM42Q69YG0 159 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 SFRP4Q6FHJ7 346 aaPredicted RBP15.1■□□□□ 0.01
CPSF4-205ENST00000440514 IZUMO2Q6UXV1 221 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 OR10AC1Q8NH08 325 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 TMEM186Q96B77 213 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 RASSF4Q9H2L5 321 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 HIF1ANQ9NWT6 349 aa15.1■□□□□ 0.01
CPSF4-205ENST00000440514 DIMT1Q9UNQ2 313 aaKnown RBP15.1■□□□□ 0.01
CPSF4-205ENST00000440514 EFCAB10A6NFE3 127 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 OR4C45A6NMZ5 311 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 DHRS7CA6NNS2 312 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 LGALS8O00214 317 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 CRLF1O75462 422 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 CCR9P51686 369 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 LCN2P80188 198 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 ALKBH1Q13686 389 aaKnown RBP15.09■□□□□ 0.01
CPSF4-205ENST00000440514 OR2G6Q5TZ20 316 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 LYPD2Q6UXB3 125 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 TMPRSS11AQ6ZMR5 421 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 SCCPDHQ8NBX0 429 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 GGHQ92820 318 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 TMEM160Q9NX00 188 aa15.09■□□□□ 0.01
CPSF4-205ENST00000440514 CNOT2Q9NZN8 540 aaKnown RBP15.09■□□□□ 0.01
CPSF4-205ENST00000440514 IGHV3OR15-7A0A075B7D8 119 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 ANKRD61A6NGH8 418 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 OOEPA6NGQ2 149 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 OR5B21A6NL26 309 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 FSTL3O95633 263 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 LHBP01229 141 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 ZFP36P26651 326 aaKnown RBP15.08■□□□□ 0
CPSF4-205ENST00000440514 VHLP40337 213 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 GMFBP60983 142 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 GNG3P63215 75 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 FAM120AOSQ5T036 256 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 TMEM244Q5VVB8 128 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 AHSA2Q719I0 299 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 BPIFB6Q8NFQ5 453 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 OR51A4Q8NGJ6 313 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 NPRL2Q8WTW4 380 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 SEH1LQ96EE3 360 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 POM121Q96HA1 1249 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 TMEM80Q96HE8 168 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 Q9H521 79 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 PLCXD1Q9NUJ7 323 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 SCN3BQ9NY72 215 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 CLEC2DQ9UHP7 191 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 EXOSC1Q9Y3B2 195 aaKnown RBP15.08■□□□□ 0
CPSF4-205ENST00000440514 RRP15Q9Y3B9 282 aaKnown RBP15.08■□□□□ 0
CPSF4-205ENST00000440514 NAV3Q8IVL0 2385 aa15.08■□□□□ 0
CPSF4-205ENST00000440514 ZFHX3Q15911 3703 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 TRAV20A0A0B4J274 112 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.07■□□□□ 0
CPSF4-205ENST00000440514 PHF1O43189 567 aaPredicted RBP15.07■□□□□ 0
CPSF4-205ENST00000440514 RHBDL1O75783 438 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 WNT2P09544 360 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 PIPP12273 146 aaPredicted RBP15.07■□□□□ 0
CPSF4-205ENST00000440514 CPT2P23786 658 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 GTF2A1P52655 376 aaPredicted RBP15.07■□□□□ 0
CPSF4-205ENST00000440514 GBX2P52951 348 aaPredicted RBP15.07■□□□□ 0
CPSF4-205ENST00000440514 ST3GAL4Q11206 333 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 FAM76BQ5HYJ3 339 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 XAF1Q6GPH4 301 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 DCDC5Q6ZRR9 648 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 FAM90A1Q86YD7 464 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 ZNF676Q8N7Q3 588 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 OR5A2Q8NGI9 324 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 TRMT10AQ8TBZ6 339 aaKnown RBP15.07■□□□□ 0
CPSF4-205ENST00000440514 C10orf35Q96D05 121 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 NEIL1Q96FI4 390 aaPredicted RBP15.07■□□□□ 0
CPSF4-205ENST00000440514 SHARPINQ9H0F6 387 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 OR51I2Q9H344 312 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 CTSZQ9UBR2 303 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 PSORS1C1Q9UIG5 152 aa15.07■□□□□ 0
CPSF4-205ENST00000440514 CAB39Q9Y376 341 aaPredicted RBP15.07■□□□□ 0
CPSF4-205ENST00000440514 KIAA1324LA8MWY0 1029 aaPredicted RBP15.06■□□□□ 0
CPSF4-205ENST00000440514 SRRM5B3KS81 715 aa15.06■□□□□ 0
CPSF4-205ENST00000440514 AKR7A2O43488 359 aa15.06■□□□□ 0
CPSF4-205ENST00000440514 GYPAP02724 150 aa15.06■□□□□ 0
CPSF4-205ENST00000440514 ISG15P05161 165 aa15.06■□□□□ 0
CPSF4-205ENST00000440514 CHRFAM7AQ494W8 412 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms