RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 HAO2Q9NYQ3 351 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 ENPP5Q9UJA9 477 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 PIGLQ9Y2B2 252 aa16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 RRP15Q9Y3B9 282 aaKnown RBP16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 SOX21Q9Y651 276 aaPredicted RBP16.45■□□□□ 0.22
SHROOM1-204ENST00000440118 ZNF732B4DXR9 585 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 TNFRSF13BO14836 293 aaPredicted RBP16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 AKR7A2O43488 359 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 HKR1P10072 659 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 ATP6V1B1P15313 513 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 EPHA2P29317 976 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 DCTDP32321 178 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 ARF6P62330 175 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 GNG3P63215 75 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 MFGE8Q08431 387 aaPredicted RBP16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 PDCD1Q15116 288 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 SLC9A3R2Q15599 337 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 DEFB112Q30KQ8 113 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 C11orf91Q3C1V1 193 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 C12orf73Q69YU5 71 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 MOB3CQ70IA8 216 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 CMTM4Q8IZR5 234 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 OR51G2Q8NGK0 314 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 LHX4Q969G2 390 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 WDR13Q9H1Z4 485 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 ADGRL4Q9HBW9 690 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 TNFRSF19Q9NS68 423 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 NUFIP1Q9UHK0 495 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 RPUSD1Q9UJJ7 312 aaKnown RBP16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 OAZ3Q9UMX2 235 aa16.44■□□□□ 0.22
SHROOM1-204ENST00000440118 A0A1B0GW55 424 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 SAC3D1A6NKF1 404 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 OR5B21A6NL26 309 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 PRR32B1ATL7 298 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 CLDN34H7C241 214 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 HOXA3O43365 443 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 KRT8P05787 483 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 DUX4L2P0CJ85 424 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 DUX4L3P0CJ86 424 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 DUX4L4P0CJ87 422 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 DUX4L5P0CJ88 424 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 DUX4L6P0CJ89 424 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 DUX4L7P0CJ90 424 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 FAHP16930 419 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 GLRA1P23415 457 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 ATP6V1E1P36543 226 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 ELF3P78545 371 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 STUMQ69YW2 141 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 DUX4L9Q6RFH8 374 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 PLEKHG7Q6ZR37 379 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 ITFG2Q969R8 447 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 CENPNQ96H22 339 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 C1orf147Q96MC9 270 aaPredicted RBP16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 TBX15Q96SF7 602 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 TBX5Q99593 518 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 APOL4Q9BPW4 351 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 CLN6Q9NWW5 311 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 DUX4Q9UBX2 424 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 ORC6Q9Y5N6 252 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 R4GMQ9 66 aa16.43■□□□□ 0.22
SHROOM1-204ENST00000440118 DHRS3O75911 302 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 GABRA2P47869 451 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 IL13RA1P78552 427 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 EGR3Q06889 387 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 CEACAM21Q3KPI0 293 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 ZNF684Q5T5D7 378 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 AADACL4Q5VUY2 407 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 PDZD9Q8IXQ8 264 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 FGFRL1Q8N441 504 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 YIPF7Q8N8F6 280 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 ZNF671Q8TAW3 534 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 TMIGD2Q96BF3 282 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 DUS3LQ96G46 650 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 RAB3IPQ96QF0 476 aaPredicted RBP16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 DNTTIP1Q9H147 329 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 CNTD2Q9H8S5 307 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 NLKQ9UBE8 527 aa16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 WARS2Q9UGM6 360 aaKnown RBP16.42■□□□□ 0.22
SHROOM1-204ENST00000440118 A0A1B0GVI7 797 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 H0YHG0 523 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 GPR37O15354 613 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 MAGEB4O15481 346 aaPredicted RBP16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 RPP14O95059 124 aaKnown RBP16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 NDUFB7P17568 137 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 TUSC1Q2TAM9 212 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 CDONQ4KMG0 1287 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 DMRTC1Q5HYR2 192 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 ZBTB37Q5TC79 503 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 HAGHLQ6PII5 290 aaPredicted RBP16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 OR10H4Q8NGA5 316 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 PYDC1Q8WXC3 89 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 MED30Q96HR3 178 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 RBM4BQ9BQ04 359 aaKnown RBP16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 FGF23Q9GZV9 251 aaPredicted RBP16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 SIRPDQ9H106 197 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 PLEKHA1Q9HB21 404 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 ACOXLQ9NUZ1 547 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 IMPAD1Q9NX62 359 aa16.41■□□□□ 0.22
SHROOM1-204ENST00000440118 SLC25A10Q9UBX3 287 aaPredicted RBP16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms