RNA–Protein interactions for RNA: ENST00000439518.5

NCKIPSD-206, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 1 (best)

Gene NCKIPSD, Length 1,214 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-206ENST00000439518 PRR31Q5SQ13 230 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 ZNF788Q6ZQV5 615 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 KCTD8Q6ZWB6 473 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 ZNF679Q8IYX0 411 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 FAM81AQ8TBF8 368 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 ASB17Q8WXJ9 295 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 HIST1H2AAQ96QV6 131 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 CHIAQ9BZP6 476 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 SNTG1Q9NSN8 517 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 DNAJB11Q9UBS4 358 aa16.73■□□□□ 0.27
NCKIPSD-206ENST00000439518 AKR7A2O43488 359 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 MITFO75030 526 aaPredicted RBP16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 ATP6V1B1P15313 513 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 MDKP21741 143 aaPredicted RBP16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 OMGP23515 440 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 EPHA2P29317 976 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 GPM6AP51674 278 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 GMFBP60983 142 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 IKZF1Q13422 519 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 ATP6AP1Q15904 470 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 AADACL4Q5VUY2 407 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 SLX4IPQ5VYV7 408 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 BCDIN3DQ7Z5W3 292 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 KIR3DL3Q8N743 410 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 ANGPTL6Q8NI99 470 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 C8orf46Q8TAG6 207 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 SSMEM1Q8WWF3 244 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 DCTN5Q9BTE1 182 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 PBOV1Q9GZY1 135 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 SLITRK2Q9H156 845 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 OR51I2Q9H344 312 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 ZNF696Q9H7X3 374 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 NUFIP1Q9UHK0 495 aaKnown RBP16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 POMT1Q9Y6A1 747 aa16.72■□□□□ 0.27
NCKIPSD-206ENST00000439518 A0A1B0GVI7 797 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 ZAR1LA6NP61 321 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 RHBDL1O75783 438 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 GNG3P63215 75 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 CEACAM21Q3KPI0 293 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 LRRC10Q5BKY1 277 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 METAP1DQ6UB28 335 aaPredicted RBP16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 FIP1L1Q6UN15 594 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 MEPCEQ7L2J0 689 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 VMO1Q7Z5L0 202 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 PIP4P2Q8N4L2 257 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 OR51E1Q8TCB6 317 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 MED30Q96HR3 178 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 GAFA1Q96PS6 74 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 CNN2Q99439 309 aaKnown RBP16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 PRRG3Q9BZD7 231 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 GPR84Q9NQS5 396 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 TNFRSF19Q9NS68 423 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 KRT84Q9NSB2 600 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 ONECUT1Q9UBC0 465 aa16.71■□□□□ 0.27
NCKIPSD-206ENST00000439518 A0A0U1RQK1 487 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZNF732B4DXR9 585 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 G3V2T6 193 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 M0R129 80 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 SIGLEC5O15389 551 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 SRSF10O75494 262 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 TFF1P04155 84 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 RIDAP52758 137 aaKnown RBP16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 RELBQ01201 579 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 MFGE8Q08431 387 aaPredicted RBP16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 RIPPLY1Q0D2K3 151 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZNF829Q3KNS6 432 aaPredicted RBP16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 CEP78Q5JTW2 689 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZBTB37Q5TC79 503 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 C12orf73Q69YU5 71 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 KDM4DQ6B0I6 523 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 LDLRAD3Q86YD5 345 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 Q8N7P7 452 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 TCEANCQ8N8B7 351 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 OR5A2Q8NGI9 324 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 PPP1R14AQ96A00 147 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 TTTY10Q9BZA0 68 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 NLKQ9UBE8 527 aa16.7■□□□□ 0.26
NCKIPSD-206ENST00000439518 TRRAPQ9Y4A5 3859 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 A0A1B0GUS0 222 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 NKX6-3A6NJ46 265 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 OR5B21A6NL26 309 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 OR2AT4A6NND4 320 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 TTRP02766 147 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 ACAA1P09110 424 aaPredicted RBP16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 FAHP16930 419 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 CAV3P56539 151 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 DGUOKQ16854 277 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 DMRTC1Q5HYR2 192 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 NXNL2Q5VZ03 156 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 ZNF322Q6U7Q0 402 aaPredicted RBP16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 COMMD2Q86X83 199 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 PDZD9Q8IXQ8 264 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 CMTM4Q8IZR5 234 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 TBC1D15Q8TC07 691 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 TMEM163Q8TC26 289 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 MNTQ99583 582 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 GABARAPL1Q9H0R8 117 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 ADGRL4Q9HBW9 690 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 C1RLQ9NZP8 487 aa16.69■□□□□ 0.26
NCKIPSD-206ENST00000439518 IKZF2Q9UKS7 526 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms