RNA–Protein interactions for RNA: ENST00000439128.6

NEK1-201, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,653 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-201ENST00000439128 GPR35Q9HC97 309 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 SHROOM3Q8TF72 1996 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 LIPT2A6NK58 231 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 AQP7P3A6NL99 342 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 CYR61O00622 381 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 ATP6V1G1O75348 118 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 LIPAP38571 399 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 LGALS7P47929 136 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 ZNF658BQ4V348 819 aaPredicted RBP10.74□□□□□ -0.69
NEK1-201ENST00000439128 XIRP1Q702N8 1843 aaKnown RBP10.74□□□□□ -0.69
NEK1-201ENST00000439128 C7orf72A4D263 438 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 ZBTB25P24278 435 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 SPCS2Q15005 226 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 C2orf76Q3KRA6 126 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 CDCP2Q5VXM1 449 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 FDCSPQ8NFU4 85 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 FAM213BQ8TBF2 198 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 SLC25A40Q8TBP6 338 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 DYNLRB2Q8TF09 96 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 NUDCD2Q8WVJ2 157 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 CLDN23Q96B33 292 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 FER1L6Q2WGJ9 1857 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 A0A1W2PPV9 198 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 RPS10-NUDT3A0A1W2PQS6 291 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 DHRS3O75911 302 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 APOC3P02656 99 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 PPT1P50897 306 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 TLE4Q04727 773 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 C20orf196Q8IYI0 205 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 PARP16Q8N5Y8 322 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 ZNF721Q8TF20 911 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 VSTM2LQ96N03 204 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 C20orf141Q9NUB4 165 aa10.74□□□□□ -0.69
NEK1-201ENST00000439128 GMDSO60547 372 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 ZNF17P17021 662 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 PSMB1P20618 241 aaKnown RBP10.73□□□□□ -0.69
NEK1-201ENST00000439128 CSRP1P21291 193 aaKnown RBP10.73□□□□□ -0.69
NEK1-201ENST00000439128 FAM214BQ7L5A3 538 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 MDP1Q86V88 176 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 ZFP62Q8NB50 900 aaPredicted RBP10.73□□□□□ -0.69
NEK1-201ENST00000439128 OR8B4Q96RC9 309 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 IGHV3OR15-7A0A075B7D8 119 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 TMEM129A0AVI4 362 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 TBX19O60806 448 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 FUT3P21217 361 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 ZNF788Q6ZQV5 615 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 RP1L1Q8IWN7 2480 aaPredicted RBP10.73□□□□□ -0.69
NEK1-201ENST00000439128 ASB10Q8WXI3 467 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 GRAMD2BQ96HH9 432 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 HRH4Q9H3N8 390 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 COL4A1P02462 1669 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 PCP4L1A6NKN8 68 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 F8W036 122 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 CCL8P80075 99 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 ACSM6Q6P461 480 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 SIAH3Q8IW03 269 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 OR51S1Q8NGJ8 323 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 ORAI1Q96D31 301 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 ZG16BQ96DA0 208 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 TMEM56Q96MV1 263 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 KLK4Q9Y5K2 254 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 TRIOBPQ9H2D6 2365 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 SPAG17Q6Q759 2223 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 ZAR1LA6NP61 321 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 SSX4O60224 188 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 FCGR3BO75015 233 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 MPZL1O95297 269 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 RAB7AP51149 207 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 TMEM268Q5VZI3 342 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 GLCCI1Q86VQ1 547 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 ZNF665Q9H7R5 613 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 OR6C3Q9NZP0 311 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 PMS2P2O95744 297 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 OR5H8P0DN80 308 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 RELAQ04206 551 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 TRAT1Q6PIZ9 186 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 OR8U1Q8NH10 309 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 LINC01560Q8TB33 94 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 MSL2Q9HCI7 577 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 PRDM4Q9UKN5 801 aa10.73□□□□□ -0.69
NEK1-201ENST00000439128 COX7A2P2O60397 106 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 FLI1Q01543 452 aaPredicted RBP10.72□□□□□ -0.69
NEK1-201ENST00000439128 STAC2Q6ZMT1 411 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 PSG6Q00889 435 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 CDK5R1Q15078 307 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 OR10P1Q8NGE3 313 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 OR10R2Q8NGX6 335 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 SMIM19Q96E16 107 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 MOGAT1Q96PD6 335 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 CNTNAP3Q9BZ76 1288 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 ISG20L2Q9H9L3 353 aaKnown RBP10.72□□□□□ -0.69
NEK1-201ENST00000439128 CD276Q5ZPR3 534 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 CREB3L2Q70SY1 520 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 PERPQ96FX8 193 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 C12orf10Q9HB07 376 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 MPC1Q9Y5U8 109 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 MAP1BP46821 2468 aaKnown RBP10.72□□□□□ -0.69
NEK1-201ENST00000439128 SCN1AP35498 2009 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 HSBP1L1C9JCN9 74 aa10.72□□□□□ -0.69
NEK1-201ENST00000439128 TXNL1O43396 289 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms