RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ADAT3Q96EY9 351 aaPredicted RBP13.6□□□□□ -0.23
SNRPB-202ENST00000438552 RNF170Q96K19 258 aa13.6□□□□□ -0.23
SNRPB-202ENST00000438552 MND1Q9BWT6 205 aa13.6□□□□□ -0.23
SNRPB-202ENST00000438552 CDCA4Q9BXL8 241 aa13.6□□□□□ -0.23
SNRPB-202ENST00000438552 ERGIC3Q9Y282 383 aa13.6□□□□□ -0.23
SNRPB-202ENST00000438552 NPTNQ9Y639 398 aa13.6□□□□□ -0.23
SNRPB-202ENST00000438552 hCG_1807616A0A1W2PRN6 198 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 ANKRD61A6NGH8 418 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 LRRC30A6NM36 301 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 IFNL4K9M1U5 179 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 OGG1O15527 345 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 ZNF205O95201 554 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 IGHV2-70P01814 119 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 ZNF20P17024 532 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 CHN2P52757 468 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 BTG1P62324 171 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 IRF3Q14653 427 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 ZMYND11Q15326 602 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 ZNF181Q2M3W8 571 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 CEACAM21Q3KPI0 293 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 FAM201AQ5SY85 155 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 RNLSQ5VYX0 342 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 PEG10Q86TG7 708 aaKnown RBP13.59□□□□□ -0.23
SNRPB-202ENST00000438552 NPRL2Q8WTW4 380 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 TSEN15Q8WW01 171 aaKnown RBP13.59□□□□□ -0.23
SNRPB-202ENST00000438552 RPL3LQ92901 407 aaKnown RBP13.59□□□□□ -0.23
SNRPB-202ENST00000438552 HPS1Q92902 700 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 ERGIC1Q969X5 290 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 FGGYQ96C11 551 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 SMIM19Q96E16 107 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 HIST1H2AAQ96QV6 131 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 CHST5Q9GZS9 411 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 CCDC90BQ9GZT6 254 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 BLOC1S6Q9UL45 172 aa13.59□□□□□ -0.23
SNRPB-202ENST00000438552 LSM2Q9Y333 95 aaKnown RBP13.59□□□□□ -0.23
SNRPB-202ENST00000438552 OR5B21A6NL26 309 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 TMEM210A6NLX4 147 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 ZNF732B4DXR9 585 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 IRF2P14316 349 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 FOSL1P15407 271 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 EEF1B2P24534 225 aaKnown RBP13.58□□□□□ -0.24
SNRPB-202ENST00000438552 CD80P33681 288 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 GNG3P63215 75 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 TMEM249Q2WGJ8 235 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 DMKNQ6E0U4 476 aaPredicted RBP13.58□□□□□ -0.24
SNRPB-202ENST00000438552 C11orf53Q8IXP5 236 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 C1orf87Q8N0U7 546 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 BOLLQ8N9W6 283 aaKnown RBP13.58□□□□□ -0.24
SNRPB-202ENST00000438552 C19orf18Q8NEA5 215 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 OR13C5Q8NGS8 318 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 TRMT10AQ8TBZ6 339 aaKnown RBP13.58□□□□□ -0.24
SNRPB-202ENST00000438552 OR5M11Q96RB7 305 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 GAL3ST1Q99999 423 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 TLNRD1Q9H1K6 362 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 METTL17Q9H7H0 456 aaPredicted RBP13.58□□□□□ -0.24
SNRPB-202ENST00000438552 RNF7Q9UBF6 113 aa13.58□□□□□ -0.24
SNRPB-202ENST00000438552 GATBO75879 557 aaKnown RBP13.57□□□□□ -0.24
SNRPB-202ENST00000438552 EGR1P18146 543 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 SOX2P48431 317 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 TAS2R43P59537 309 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 KRTAP1-1Q07627 177 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 UBE2V2Q15819 145 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 WDR82Q6UXN9 313 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 PRSS48Q7RTY5 328 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 SCCPDHQ8NBX0 429 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 OR5A2Q8NGI9 324 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 LRRC29Q8WV35 223 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 PP6455Q8WZ26 134 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 C10orf35Q96D05 121 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 PGLYRP3Q96LB9 341 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 GSX1Q9H4S2 264 aaPredicted RBP13.57□□□□□ -0.24
SNRPB-202ENST00000438552 DHDHQ9UQ10 334 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 LRCH1Q9Y2L9 728 aa13.57□□□□□ -0.24
SNRPB-202ENST00000438552 FAM230AA0A1W2PPH8 454 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 PQLC2LA1A4F0 135 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 C3orf80F5H4A9 247 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 CDIPTO14735 213 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 IGHV4-31P0DP07 118 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 ZNF16P17020 682 aaPredicted RBP13.56□□□□□ -0.24
SNRPB-202ENST00000438552 MAP2K4P45985 399 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 GABARAPL2P60520 117 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 SPHARQ15513 63 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 MED22Q15528 200 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 GCSAMQ8N6F7 178 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 OR13C9Q8NGT0 318 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 GPR148Q8TDV2 347 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 GHSRQ92847 366 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 OR51I2Q9H344 312 aa13.56□□□□□ -0.24
SNRPB-202ENST00000438552 IGKV1-9A0A0C4DH69 117 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 RHBDL1O75783 438 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 LY6G6DO95868 133 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 IGHV2-5P01817 119 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 CELP19835 753 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 MDH2P40926 338 aaKnown RBP13.55□□□□□ -0.24
SNRPB-202ENST00000438552 GMFBP60983 142 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 LMO4P61968 165 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 BDH1Q02338 343 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 CNN3Q15417 329 aaKnown RBP13.55□□□□□ -0.24
SNRPB-202ENST00000438552 FAM76BQ5HYJ3 339 aa13.55□□□□□ -0.24
SNRPB-202ENST00000438552 HAGHLQ6PII5 290 aaPredicted RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms