RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 LHFPL2Q6ZUX7 228 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 BATF2Q8N1L9 274 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 COMMD1Q8N668 190 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 OR1J1Q8NGS3 322 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 MCHR2Q969V1 340 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 GNPNAT1Q96EK6 184 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-205ENST00000438362 REEP6Q96HR9 211 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 AK3Q9UIJ7 227 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 TIMM10BQ9Y5J6 103 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 URGCP-MRPS24S4R325 110 aa5.95□□□□□ -1.46
CSDE1-205ENST00000438362 IGHV3-15A0A0B4J1V0 119 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF724A8MTY0 619 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF814B7Z6K7 855 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 DHRS3O75911 302 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 DXOO77932 396 aaKnown RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 HLA-DOBP13765 273 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 NAT1P18440 290 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 FCARP24071 287 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 DVL1P1P54792 670 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 RAB1AP62820 205 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 TMEM255AQ5JRV8 349 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 HIST2H3PS2Q5TEC6 136 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 RPL7L1Q6DKI1 246 aaKnown RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 YRDCQ86U90 279 aaKnown RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 SKA3Q8IX90 412 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 CARFQ8N187 725 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 OR10G3Q8NGC4 313 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 OR8B12Q8NGG6 310 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 SPSB1Q96BD6 273 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 INTS12Q96CB8 462 aaKnown RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF576Q9H609 170 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 ANKRD10Q9NXR5 420 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 KLK13Q9UKR3 277 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 ST3GAL6Q9Y274 331 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 A0A087WZY1 265 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 C2CD4DB7Z1M9 353 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 PPP1R2P9O14990 202 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 SRFP11831 508 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 RPS4XP62701 263 aaKnown RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 MSMO1Q15800 293 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 GUK1Q16774 197 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 MICBQ29980 383 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 MIDNQ504T8 468 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 COL13A1Q5TAT6 717 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 CBLN2Q8IUK8 224 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 ADAD2Q8NCV1 583 aaKnown RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 RGP1Q92546 391 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 PIK3IP1Q96FE7 263 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 ADAM19Q9H013 955 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 IFT22Q9H7X7 185 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 TMEM74BQ9NUR3 256 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 MED9Q9NWA0 146 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 FBXL17Q9UF56 701 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 NLRC5Q86WI3 1866 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 OR2M5A3KFT3 312 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 LIPT2A6NK58 231 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 NXPH3O95157 252 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 CTXN2P0C2S0 81 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 AADACP22760 399 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 PTAFRP25105 342 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 DEFA6Q01524 100 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 HAGHQ16775 308 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 GAB4Q2WGN9 574 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 SHEQ5VZ18 495 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 JMJD6Q6NYC1 403 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 C6orf201Q7Z4U5 140 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 C9orf40Q8IXQ3 194 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 OSR2Q8N2R0 312 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 IL22RA1Q8N6P7 574 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 ZNRF4Q8WWF5 429 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 ADAT3Q96EY9 351 aaPredicted RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 NPAS1Q99742 590 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 TRAPPC2LQ9UL33 140 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 NPTNQ9Y639 398 aa5.94□□□□□ -1.46
CSDE1-205ENST00000438362 TDRD6O60522 2096 aaKnown RBP5.94□□□□□ -1.46
CSDE1-205ENST00000438362 TSTD3H0UI37 97 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 CDK2AP1O14519 115 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 HSD17B6O14756 317 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 SPRY1O43609 319 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-205ENST00000438362 IGHV3-9P01782 118 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 FAM157BP0CG42 384 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 IL2RGP31785 369 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 SURF2Q15527 256 aaPredicted RBP5.93□□□□□ -1.46
CSDE1-205ENST00000438362 GGNBP1Q5YKI7 109 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 RBMS3Q6XE24 437 aaKnown RBP5.93□□□□□ -1.46
CSDE1-205ENST00000438362 SLC25A26Q70HW3 274 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 FBXL14Q8N1E6 418 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 ZNF611Q8N823 705 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 OR51H1Q8NH63 302 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 NANPQ8TBE9 248 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 MALSU1Q96EH3 234 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 SLC39A9Q9NUM3 307 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 GFOD1Q9NXC2 390 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 PRR13Q9NZ81 148 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 PIPOXQ9P0Z9 390 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 LPAR3Q9UBY5 353 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 OR14J1Q9UGF5 321 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 SLCO1B1Q9Y6L6 691 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 IGLV1-36A0A0B4J1U3 117 aa5.93□□□□□ -1.46
CSDE1-205ENST00000438362 ZFP92A6NM28 416 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms