RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 ARR3P36575 388 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 MTCP1P56278 107 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 TMEM50BP56557 158 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 ARL6IP1Q15041 203 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 ZBTB37Q5TC79 503 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 DPPA2Q7Z7J5 298 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 CCDC107Q8WV48 283 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 TECTBQ96PL2 329 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 GON7Q9BXV9 100 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 MYOZ1Q9NP98 299 aaPredicted RBP22.33■■□□□ 1.16
CPNE1-216ENST00000437340 DLL4Q9NR61 685 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 PLEKHA6Q9Y2H5 1048 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 KCNK7Q9Y2U2 307 aa22.33■■□□□ 1.16
CPNE1-216ENST00000437340 A0A096LPE4 126 aa22.32■■□□□ 1.16
CPNE1-216ENST00000437340 A0A1W2PPZ6 126 aa22.32■■□□□ 1.16
CPNE1-216ENST00000437340 ZNF92Q03936 586 aa22.32■■□□□ 1.16
CPNE1-216ENST00000437340 DMRTC1Q5HYR2 192 aa22.32■■□□□ 1.16
CPNE1-216ENST00000437340 C9orf135Q5VTT2 229 aa22.32■■□□□ 1.16
CPNE1-216ENST00000437340 LHFPL2Q6ZUX7 228 aa22.32■■□□□ 1.16
CPNE1-216ENST00000437340 OR4S1Q8NGB4 309 aa22.32■■□□□ 1.16
CPNE1-216ENST00000437340 OR51T1Q8NGJ9 327 aa22.32■■□□□ 1.16
CPNE1-216ENST00000437340 MSRB2Q9Y3D2 182 aa22.32■■□□□ 1.16
CPNE1-216ENST00000437340 FOXI3A8MTJ6 420 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-216ENST00000437340 MFNGO00587 321 aa22.31■■□□□ 1.16
CPNE1-216ENST00000437340 EDN3P14138 238 aa22.31■■□□□ 1.16
CPNE1-216ENST00000437340 NAT1P18440 290 aa22.31■■□□□ 1.16
CPNE1-216ENST00000437340 AGTR1P30556 359 aa22.31■■□□□ 1.16
CPNE1-216ENST00000437340 FOXG1P55316 489 aaPredicted RBP22.31■■□□□ 1.16
CPNE1-216ENST00000437340 OR14I1A6ND48 311 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 NRASP01111 189 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 CPT2P23786 658 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 CBX5P45973 191 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 LAMTOR1Q6IAA8 161 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 GVQW1Q8N7I0 195 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 SLC6A7Q99884 636 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 TMEM82A0PJX8 343 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 HLA-HP01893 362 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 RBP2P50120 134 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 NDUFA5Q16718 116 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 DEFB109BQ30KR1 87 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 TMEM53Q6P2H8 277 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 ARHGAP5-AS1Q96IT6 56 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 GLRX2Q9NS18 164 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 MGAT4CQ9UBM8 478 aa22.3■■□□□ 1.16
CPNE1-216ENST00000437340 LOC100509620A0A075B734 347 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 ZNF816-ZNF321PA0A0X1KG74 233 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 CEACAM4O75871 244 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 SERPINA2P20848 420 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 MPGP29372 298 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 PMP22Q01453 160 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 Q5BKY6 102 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 FBXW9Q5XUX1 488 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 BORCS8Q96FH0 119 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 GMPPAQ96IJ6 420 aaPredicted RBP22.29■■□□□ 1.16
CPNE1-216ENST00000437340 OCSTAMPQ9BR26 566 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 METTL9Q9H1A3 318 aa22.29■■□□□ 1.16
CPNE1-216ENST00000437340 ACTBL2Q562R1 376 aa22.28■■□□□ 1.16
CPNE1-216ENST00000437340 RTL6Q6ICC9 239 aa22.28■■□□□ 1.16
CPNE1-216ENST00000437340 ASCL4Q6XD76 172 aa22.28■■□□□ 1.16
CPNE1-216ENST00000437340 NLRC3Q7RTR2 1065 aa22.28■■□□□ 1.16
CPNE1-216ENST00000437340 C9orf62Q8N4C0 152 aa22.28■■□□□ 1.16
CPNE1-216ENST00000437340 OR13C8Q8NGS7 320 aa22.28■■□□□ 1.16
CPNE1-216ENST00000437340 SNIP1Q8TAD8 396 aaKnown RBP22.28■■□□□ 1.16
CPNE1-216ENST00000437340 ZNF431Q8TF32 576 aaPredicted RBP22.28■■□□□ 1.16
CPNE1-216ENST00000437340 KCNN3Q9UGI6 736 aa22.28■■□□□ 1.16
CPNE1-216ENST00000437340 LOC400499M0QZD8 3231 aa22.28■■□□□ 1.16
CPNE1-216ENST00000437340 FREM1Q5H8C1 2179 aa22.28■■□□□ 1.16
CPNE1-216ENST00000437340 ZNF780AO75290 641 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-216ENST00000437340 CA11O75493 328 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 GIPP09681 153 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-216ENST00000437340 TMEM225BP0DP42 221 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 OR3A2P47893 321 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 FUT6P51993 359 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 RAB1AP62820 205 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 PPA1Q15181 289 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 POFUT1Q9H488 388 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 ELL3Q9HB65 397 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-216ENST00000437340 MGAT4AQ9UM21 535 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 SLC7A11Q9UPY5 501 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 HSPB11Q9Y547 144 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 CFAP47Q6ZTR5 3102 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 SERPINE3A8MV23 424 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 CD79AP11912 226 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 HRH1P35367 487 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 CXADRP78310 365 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 PLP2Q04941 152 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 OR52W1Q6IF63 320 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 RTN4RL2Q86UN3 420 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 CD163Q86VB7 1156 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 OR52B4Q8NGK2 314 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 OR10K1Q8NGX5 313 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 APOBEC3DQ96AK3 386 aaPredicted RBP22.27■■□□□ 1.16
CPNE1-216ENST00000437340 PRSS50Q9UI38 385 aa22.27■■□□□ 1.16
CPNE1-216ENST00000437340 IGKV1-27A0A075B6S5 117 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 FAM230AA0A1W2PPH8 454 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 SS18L1O75177 396 aaPredicted RBP22.26■■□□□ 1.15
CPNE1-216ENST00000437340 RAD51DO75771 328 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 OR2A4O95047 310 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 DNASE1P24855 282 aa22.26■■□□□ 1.15
CPNE1-216ENST00000437340 BLVRBP30043 206 aaPredicted RBP22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms