RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 LGALS4P56470 323 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 KRTAP10-11P60412 298 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 SPIBQ01892 262 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 RFX4Q33E94 735 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 STUMQ69YW2 141 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 HCP5Q6MZN7 132 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 DRAM2Q6UX65 266 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 WDR82Q6UXN9 313 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 CFAP77Q6ZQR2 320 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 ZNF788Q6ZQV5 615 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 PTCHD4Q6ZW05 846 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 DPY19L4Q7Z388 723 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 NAA40Q86UY6 237 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 LINC00346Q8IVM7 164 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 CYB561A3Q8NBI2 242 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 OR1M1Q8NGA1 313 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 OR8J3Q8NGG0 315 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 OR56B2PQ8NGI1 322 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 OR4C15Q8NGM1 316 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 OR10Z1Q8NGY1 313 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 PIFOQ8TCI5 191 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 STON2Q8WXE9 905 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 DPF1Q92782 380 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 DUS3LQ96G46 650 aaKnown RBP6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 TPD52L3Q96J77 140 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 CLUHP3Q96NS8 147 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 NKX3-1Q99801 234 aaPredicted RBP6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 TLNRD1Q9H1K6 362 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 PNRC2Q9NPJ4 139 aaKnown RBP6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 SLC25A10Q9UBX3 287 aaPredicted RBP6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 KCNG2Q9UJ96 466 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 B9D1Q9UPM9 204 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 SIGLEC7Q9Y286 467 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 IER3IP1Q9Y5U9 82 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 U3KQK5 164 aa6.77□□□□□ -1.33
NIF3L1-208ENST00000436412 A0A1W2PPH5 198 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 F2RL2O00254 374 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 DCTN6O00399 190 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 IMPA2O14732 288 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 FFAR1O14842 300 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 SIGLEC5O15389 551 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 XRCC2O43543 280 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 NPPAP01160 153 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 POU1F1P28069 291 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 OTX1P32242 354 aaPredicted RBP6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 KDELR2P33947 212 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 BMXP51813 675 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 SNAI3Q3KNW1 292 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 GLYATL3Q5SZD4 288 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 TBPL2Q6SJ96 375 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 ZBTB46Q86UZ6 589 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 OR6V1Q8N148 313 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 OR2AE1Q8NHA4 323 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 SPSB4Q96A44 273 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 TSSK2Q96PF2 358 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 RAB3IPQ96QF0 476 aaPredicted RBP6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 RHCGQ9UBD6 479 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 ZNF391Q9UJN7 358 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 TCF19Q9Y242 345 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 LRP12Q9Y561 859 aa6.76□□□□□ -1.33
NIF3L1-208ENST00000436412 hCG_1809904A0A1W2PP81 198 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 A0A1W2PPE2 198 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 A0A1W2PR64 198 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 A0A1W2PRV1 198 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 H3BUI4 141 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 CDIPTO14735 213 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 ARPC3O15145 178 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 ZFPL1O95159 310 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 RENP00797 406 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 ACAA1P09110 424 aaPredicted RBP6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 TROVE2P10155 538 aaKnown RBP eCLIP6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 NDUFB7P17568 137 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 VDAC2P45880 294 aaPredicted RBP6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 YAP1P46937 504 aaKnown RBP6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 CSNK2BP67870 215 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 ELF3P78545 371 aaPredicted RBP6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 FHL2Q14192 279 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 HABP2Q14520 560 aaPredicted RBP6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 SNCBQ16143 134 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 DGUOKQ16854 277 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 LRRC23Q53EV4 343 aaPredicted RBP6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 CPLX4Q7Z7G2 160 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 OR5AU1Q8NGC0 362 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 OR5T2Q8NGG2 359 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 OR5K1Q8NHB7 308 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 ANGPTL6Q8NI99 470 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 RPS4Y2Q8TD47 263 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 SEH1LQ96EE3 360 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 GAFA1Q96PS6 74 aa6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 KRCC1Q9NPI7 259 aaPredicted RBP6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 TSSC4Q9Y5U2 329 aaPredicted RBP6.75□□□□□ -1.33
NIF3L1-208ENST00000436412 LYSTQ99698 3801 aa6.74□□□□□ -1.33
NIF3L1-208ENST00000436412 A0A1W2PRX2 142 aa6.74□□□□□ -1.33
NIF3L1-208ENST00000436412 TCRBV4S1A1TA0A5B7 111 aa6.74□□□□□ -1.33
NIF3L1-208ENST00000436412 A6NDX4 124 aa6.74□□□□□ -1.33
NIF3L1-208ENST00000436412 FAM90A8PA6NJQ4 464 aa6.74□□□□□ -1.33
NIF3L1-208ENST00000436412 TMEM210A6NLX4 147 aa6.74□□□□□ -1.33
NIF3L1-208ENST00000436412 J3KTA2 159 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms