RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 SCO1O75880 301 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 HPNP05981 417 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 HOXD4P09016 255 aaPredicted RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 PET100P0DJ07 73 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 LYL1P12980 280 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 TPT1P13693 172 aaKnown RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 SERPINA2P20848 420 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 CRYGSP22914 178 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 RGS19P49795 217 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 B3GALT5-AS1P59052 145 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 PCBD1P61457 104 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 SNTB1Q13884 538 aaKnown RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 DCAF12Q5T6F0 453 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 PLXDC2Q6UX71 529 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 CLEC18BQ6UXF7 455 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 AAED1Q7RTV5 226 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 OR1F12Q8NHA8 337 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 STOML3Q8TAV4 291 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 DCUN1D4Q92564 292 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 SGK3Q96BR1 496 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 ZPBPQ9BS86 351 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 SRXN1Q9BYN0 137 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 C5orf66Q9H5L9 145 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 ELL3Q9HB65 397 aaPredicted RBP9.13□□□□□ -0.95
CD44-210ENST00000434472 EHFQ9NZC4 300 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 CSAG2Q9Y5P2 127 aa9.13□□□□□ -0.95
CD44-210ENST00000434472 ASCC3Q8N3C0 2202 aaKnown RBP9.12□□□□□ -0.95
CD44-210ENST00000434472 LOC105371267A0A1B0GV96 52 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 C5orf63A6NC05 138 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 NUDT19A8MXV4 375 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 F8VVB4 439 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 F8VWA3 439 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 G3V3Y1 287 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 LINC01387J3KSC0 135 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 SERPINA5P05154 406 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 PGAM2P15259 253 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 ANOS1P23352 680 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 ATXN7L3Q14CW9 347 aaPredicted RBP9.12□□□□□ -0.95
CD44-210ENST00000434472 PAN3Q58A45 887 aaKnown RBP9.12□□□□□ -0.95
CD44-210ENST00000434472 ABLIM2Q6H8Q1 611 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 H3F3CQ6NXT2 135 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 PRSS54Q6PEW0 395 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 SLC23A3Q6PIS1 610 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 CRIP3Q6Q6R5 217 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 UQCC3Q6UW78 93 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 LHFPL2Q6ZUX7 228 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 C1QL2Q7Z5L3 287 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 RTN4RL2Q86UN3 420 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 RELL2Q8NC24 303 aaPredicted RBP9.12□□□□□ -0.95
CD44-210ENST00000434472 OR5D18Q8NGL1 313 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 OR2V1Q8NHB1 315 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 NPRL2Q8WTW4 380 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 PIGTQ969N2 578 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 FBXO17Q96EF6 278 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 C2orf50Q96LR7 162 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 Q96M66 194 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 RTBDNQ9BSG5 229 aaPredicted RBP9.12□□□□□ -0.95
CD44-210ENST00000434472 PIGMQ9H3S5 423 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 RGCCQ9H4X1 137 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 PCDHB16Q9NRJ7 776 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 TMEM38BQ9NVV0 291 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 PADI1Q9ULC6 663 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 HSF4Q9ULV5 492 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 TIMM10BQ9Y5J6 103 aa9.12□□□□□ -0.95
CD44-210ENST00000434472 UNC80Q8N2C7 3258 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 TEX46H3BTG2 121 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 SYNGR3O43761 229 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 CSTBP04080 98 aaKnown RBP9.11□□□□□ -0.95
CD44-210ENST00000434472 SERPINA7P05543 415 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 TMEM225BP0DP42 221 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 CNR1P21554 472 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 ACP1P24666 158 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 MTCP1P56278 107 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 PPIAP62937 165 aaKnown RBP9.11□□□□□ -0.95
CD44-210ENST00000434472 EIF5AP63241 154 aaKnown RBP9.11□□□□□ -0.95
CD44-210ENST00000434472 SSPNQ14714 243 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 SLC9A3R2Q15599 337 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 TUSC1Q2TAM9 212 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 KRTAP27-1Q3LI81 207 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 TRIM61Q5EBN2 209 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 RIPPLY2Q5TAB7 128 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 C6orf15Q6UXA7 325 aaPredicted RBP9.11□□□□□ -0.95
CD44-210ENST00000434472 ASCL4Q6XD76 172 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 PPP1R32Q7Z5V6 425 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 ZNF100Q8IYN0 542 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 SLC38A6Q8IZM9 456 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 SPERTQ8NA61 448 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 MRPS24Q96EL2 167 aaKnown RBP9.11□□□□□ -0.95
CD44-210ENST00000434472 PIK3IP1Q96FE7 263 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 POM121Q96HA1 1249 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 REEP6Q96HR9 211 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 TECTBQ96PL2 329 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 DMRTA2Q96SC8 542 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 WDR13Q9H1Z4 485 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 METTL8Q9H825 291 aaKnown RBP9.11□□□□□ -0.95
CD44-210ENST00000434472 GPR173Q9NS66 373 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 PLEKHJ1Q9NW61 149 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 DNAJB11Q9UBS4 358 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 GPR160Q9UJ42 338 aa9.11□□□□□ -0.95
CD44-210ENST00000434472 RAB19A4D1S5 217 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms