RNA–Protein interactions for RNA: ENST00000433822.1

COL17A1-204, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 5

Gene COL17A1, Length 537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-204ENST00000433822 TOR2AQ5JU69 321 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 C1QTNF12Q5T7M4 302 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 AWAT2Q6E213 333 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 CORO6Q6QEF8 472 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 DRAM2Q6UX65 266 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 TMUB2Q71RG4 321 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 ABHD12BQ7Z5M8 362 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 HSD17B13Q7Z5P4 300 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 TRAPPC6BQ86SZ2 158 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 PEG10Q86TG7 708 aaKnown RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 FJX1Q86VR8 437 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 RPS19BP1Q86WX3 136 aaKnown RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 HOGA1Q86XE5 327 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 ANGPTL5Q86XS5 388 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 C20orf196Q8IYI0 205 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 GPR137CQ8N3F9 429 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 KCNRGQ8N5I3 272 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 OR5M9Q8NGP3 310 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 OR5M1Q8NGP8 315 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 OR51E1Q8TCB6 317 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 FBXW5Q969U6 566 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 NABP1Q96AH0 204 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 SPSB1Q96BD6 273 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 TECTBQ96PL2 329 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 PHB2Q99623 299 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 SLC6A7Q99884 636 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 TMEM59Q9BXS4 323 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 TINAGL1Q9GZM7 467 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 RGCCQ9H4X1 137 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 IFT46Q9NQC8 304 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 GPR84Q9NQS5 396 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 HPF1Q9NWY4 346 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 FBXO4Q9UKT5 387 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 MRPS28Q9Y2Q9 187 aaKnown RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 PTRH2Q9Y3E5 179 aaKnown RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 PCDHGA1Q9Y5H4 931 aa6.52□□□□□ -1.37
COL17A1-204ENST00000433822 NCOA6Q14686 2063 aaPredicted RBP6.52□□□□□ -1.37
COL17A1-204ENST00000433822 TRBV6-7A0A0A0MS04 114 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF814B7Z6K7 855 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 NPIPA2E9PIF3 369 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 NPIPA3F8WFD2 350 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 GOSR2O14653 212 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 RRP8O43159 456 aaKnown RBP6.51□□□□□ -1.37
COL17A1-204ENST00000433822 LAMTOR5O43504 91 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 RAD1O60671 282 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 CDC14BO60729 498 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 TSC22D2O75157 780 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 CFDP00746 253 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-204ENST00000433822 CCL3P10147 92 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF28P17035 718 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 CRYGSP22914 178 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 CPT2P23786 658 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 CD34P28906 385 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 MPGP29372 298 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 PMELP40967 661 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 CLDN17P56750 224 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 CXADRP78310 365 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 NAAAQ02083 359 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 SCRN3Q0VDG4 424 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 SSPNQ14714 243 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 RAB35Q15286 201 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 TMEM128Q5BJH2 165 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 ABLIM2Q6H8Q1 611 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 C11orf87Q6NUJ2 197 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 JMJD6Q6NYC1 403 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-204ENST00000433822 C11orf88Q6PI97 169 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 GSG1LQ6UXU4 331 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 C22orf34Q6ZV56 151 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 GPAT4Q86UL3 456 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 COMMD7Q86VX2 200 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 LHFPL1Q86WI0 220 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 TMEM17Q86X19 198 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF283Q8N7M2 679 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 ACBD4Q8NC06 268 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 OR9K2Q8NGE7 335 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 OR52B4Q8NGK2 314 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 OR13C9Q8NGT0 318 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 TERB2Q8NHR7 220 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 LRRC20Q8TCA0 184 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 CPT1CQ8TCG5 803 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 C17orf50Q8WW18 174 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 HAS2Q92819 552 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 MR1Q95460 341 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 SPTSSAQ969W0 71 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 RAB3CQ96E17 227 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 WBP1Q96G27 269 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 BBC3Q96PG8 261 aaPredicted RBP6.51□□□□□ -1.37
COL17A1-204ENST00000433822 DHRS9Q9BPW9 319 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 DDA1Q9BW61 102 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 NMES1Q9C002 83 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 SLC25A32Q9H2D1 315 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 KCNK15Q9H427 330 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 TMEM185BQ9H7F4 350 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 SEC61A2Q9H9S3 476 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF160Q9HCG1 818 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 ZNF224Q9NZL3 707 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 COMMD9Q9P000 198 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 ASH2LQ9UBL3 628 aa6.51□□□□□ -1.37
COL17A1-204ENST00000433822 DKKL1Q9UK85 242 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms