RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 COMMD3-BMI1R4GMX3 469 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 ASPMQ8IZT6 3477 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 DOCK8Q8NF50 2099 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 WDR87Q6ZQQ6 2873 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 LTBP2Q14767 1821 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 PSME4Q14997 1843 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 PCM1Q15154 2024 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 DMDP11532 3685 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 CABIN1Q9Y6J0 2220 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 MAST2Q6P0Q8 1798 aa1.93□□□□□ -2.1
HMGB1P27-201ENST00000431429 ANKRD12Q6UB98 2062 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 TECTAO75443 2155 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 TRAV6A0A075B6T7 132 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 IGKV6D-41A0A0C4DH26 115 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 ANKRD65E5RJM6 399 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 GABRPO00591 440 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 CIAO1O76071 339 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 YIF1AO95070 293 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 GABARAPO95166 117 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 FARS2O95363 451 aaKnown RBP1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 TDP2O95551 362 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 KLK1P06870 262 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF806P0C7X5 589 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 GFAPP14136 432 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 IGFBP3P17936 291 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 MAGP20916 626 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 GPR1P46091 355 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 RPS9P46781 194 aaKnown RBP1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 P2RX1P51575 399 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 GFERP55789 205 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 ATP6V0D1P61421 351 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 ARG2P78540 354 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 LCN2P80188 198 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF33AQ06730 810 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 SYCNQ0VAF6 134 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 GINS1Q14691 196 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 WDR43Q15061 677 aaKnown RBP eCLIP1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 C5orf64Q2M2E5 130 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 DEFB116Q30KQ4 102 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 METTL21CQ5VZV1 264 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 ULK3Q6PHR2 472 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 VTCN1Q7Z7D3 282 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 WDR86Q86TI4 376 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 VKORC1L1Q8N0U8 176 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 COX18Q8N8Q8 333 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 PIFOQ8TCI5 191 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 RAB1CQ92928 201 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 FAM19A4Q96LR4 140 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 CALN1Q9BXU9 219 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 CLSTN2Q9H4D0 955 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 ASH1LQ9NR48 2969 aaKnown RBP1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF257Q9Y2Q1 563 aa1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 SIPA1L3O60292 1781 aaPredicted RBP1.92□□□□□ -2.1
HMGB1P27-201ENST00000431429 A0A0G2JMZ2 1700 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 DOCK3Q8IZD9 2030 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 MAST4O15021 2626 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 TRIOO75962 3097 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 COL27A1Q8IZC6 1860 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 A0A1W2PPV4 95 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 ANKRD63C9JTQ0 380 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 TMX2-CTNND1H3BSU7 103 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 NMT2O60551 498 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 KRT16P08779 473 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 CSRP1P21291 193 aaKnown RBP1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 LONP1P36776 959 aaKnown RBP1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 MYCNOSP40205 109 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 CSKP41240 450 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 PPICP45877 212 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 HCAR3P49019 387 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 PPOXP50336 477 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 MNAT1P51948 309 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 CLDN6P56747 220 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 VSX2P58304 361 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR2B8PP59922 312 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 UBE2NP61088 152 aaKnown RBP1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 RPS23P62266 143 aaKnown RBP1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 UBE2SQ16763 222 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 ORMDL2Q53FV1 153 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 TPRG1LQ5T0D9 272 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZFP2Q6ZN57 461 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 CDKL3Q8IVW4 592 aaPredicted RBP1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 ENTHD1Q8IYW4 607 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 GATSQ8NAP1 163 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR10G2Q8NGC3 310 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR6N1Q8NGY5 312 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR51E1Q8TCB6 317 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 APH1AQ96BI3 265 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 SGTBQ96EQ0 304 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 ZNF414Q96IQ9 312 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 GPR21Q99679 349 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 UQCC2Q9BRT2 126 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 SPNS1Q9H2V7 528 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 POMKQ9H5K3 350 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 SLC38A10Q9HBR0 1119 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 FAM49BQ9NUQ9 324 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 SLC39A1Q9NY26 324 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 OR12D3Q9UGF7 316 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 ARAP2Q8WZ64 1704 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 IGSF9BQ9UPX0 1349 aa1.91□□□□□ -2.1
HMGB1P27-201ENST00000431429 OTOFQ9HC10 1997 aa1.9□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms