RNA–Protein interactions for RNA: ENST00000430889.2

HOXC4-202, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,666 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-202ENST00000430889 ARHGAP21Q5T5U3 1957 aa12.15□□□□□ -0.46
HOXC4-202ENST00000430889 IGKV1-27A0A075B6S5 117 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 C9orf170A2RU37 121 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 RFPL4AA6NLU0 287 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 RFPL4AL1F8VTS6 287 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 L7N2F9 121 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 CDK2AP1O14519 115 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 PMP2P02689 132 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 C4BPBP20851 252 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 RFC3P40938 356 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 HTR5AP47898 357 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 PCBD1P61457 104 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.14□□□□□ -0.47
HOXC4-202ENST00000430889 ARRDC1Q8N5I2 433 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 TMEM251Q8N6I4 163 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 OR51T1Q8NGJ9 327 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 SPSB4Q96A44 273 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 Q96M66 194 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 RGCCQ9H4X1 137 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 RNF122Q9H9V4 155 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 GPR173Q9NS66 373 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 ABI3Q9P2A4 366 aa12.14□□□□□ -0.47
HOXC4-202ENST00000430889 KNTC1P50748 2209 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 MSTNO14793 375 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 NME2P1O60361 137 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 TNFSF15O95150 251 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 HLA-AP01891 365 aaKnown RBP12.13□□□□□ -0.47
HOXC4-202ENST00000430889 PPP3CBP16298 524 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 NME2P22392 152 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 ITGA3P26006 1051 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 CD34P28906 385 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 MAGEA5P43359 124 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 OR3A3P47888 321 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 HLXQ14774 488 aaPredicted RBP12.13□□□□□ -0.47
HOXC4-202ENST00000430889 OR8B8Q15620 311 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 COLCA1Q6ZS62 124 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 PEG10Q86TG7 708 aaKnown RBP12.13□□□□□ -0.47
HOXC4-202ENST00000430889 ADAD2Q8NCV1 583 aaKnown RBP12.13□□□□□ -0.47
HOXC4-202ENST00000430889 OR10K1Q8NGX5 313 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 TERB2Q8NHR7 220 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 C1QTNF5Q9BXJ0 243 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 IRF2BPLQ9H1B7 796 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 SLC6A15Q9H2J7 730 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 BCO1Q9HAY6 547 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 PLA2G3Q9NZ20 509 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 UBQLN2Q9UHD9 624 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 NOSIPQ9Y314 301 aaKnown RBP12.13□□□□□ -0.47
HOXC4-202ENST00000430889 TNRC6AQ8NDV7 1962 aaKnown RBP12.13□□□□□ -0.47
HOXC4-202ENST00000430889 TUBAL3A6NHL2 446 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 FIGNL2A6NMB9 653 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 DBX1A6NMT0 343 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 SERPINE3A8MV23 424 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 NOS1APO75052 506 aaPredicted RBP12.13□□□□□ -0.47
HOXC4-202ENST00000430889 LCATP04180 440 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 EDN3P14138 238 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 RPA2P15927 270 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 SERPINA2P20848 420 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 CPT2P23786 658 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 S100A11P31949 105 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 FAM3AP98173 230 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 PPA1Q15181 289 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 NHLRC3Q5JS37 347 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 NSUN5P2Q63ZY6 315 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 TMEM65Q6PI78 240 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 TMUB2Q71RG4 321 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 PIP4P1Q86T03 277 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 PRDM14Q9GZV8 571 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 SLC7A10Q9NS82 523 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 KCNN3Q9UGI6 736 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 GPR132Q9UNW8 380 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 OSGIN2Q9Y236 505 aa12.13□□□□□ -0.47
HOXC4-202ENST00000430889 FAM166BA8MTA8 275 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 ZNF724A8MTY0 619 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 SP1P08047 785 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 LIPCP11150 499 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 PRKACBP22694 351 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 BLVRBP30043 206 aaPredicted RBP12.12□□□□□ -0.47
HOXC4-202ENST00000430889 ZNF92Q03936 586 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 ARL6IP1Q15041 203 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 ESCO2Q56NI9 601 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 SIGIRRQ6IA17 410 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 GALNTL5Q7Z4T8 443 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 GLRX5Q86SX6 157 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 OR8H3Q8N146 312 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 CPEB3Q8NE35 698 aaKnown RBP12.12□□□□□ -0.47
HOXC4-202ENST00000430889 TMEM185AQ8NFB2 350 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 MARCH1Q8TCQ1 289 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 TMEM230Q96A57 120 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 ZNF230Q9UIE0 474 aaPredicted RBP12.12□□□□□ -0.47
HOXC4-202ENST00000430889 MAB21L2Q9Y586 359 aa12.12□□□□□ -0.47
HOXC4-202ENST00000430889 ZNF407Q9C0G0 2248 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 FXYD6-FXYD2A0A087WZ82 144 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 ARPC5O15511 151 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 MRPL33O75394 65 aaKnown RBP12.11□□□□□ -0.47
HOXC4-202ENST00000430889 B3GALNT1O75752 331 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 DUS4LO95620 317 aaKnown RBP12.11□□□□□ -0.47
HOXC4-202ENST00000430889 IFNA6P05013 189 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 CALCRP30988 508 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 TAS2R31P59538 309 aa12.11□□□□□ -0.47
HOXC4-202ENST00000430889 SORDQ00796 357 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms