RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 GAFA1Q96PS6 74 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 HIST1H2AAQ96QV6 131 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 FEVQ99581 238 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 WDR13Q9H1Z4 485 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 OR51V1Q9H2C8 321 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 SEMA6AQ9H2E6 1030 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 NLKQ9UBE8 527 aa12.21□□□□□ -0.45
MSH5-208ENST00000429846 ZNF816-ZNF321PA0A0X1KG74 233 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 A0A1W2PQ09 198 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 B2RBV5 119 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 AKR7A2O43488 359 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 ACAA1P09110 424 aaPredicted RBP12.2□□□□□ -0.46
MSH5-208ENST00000429846 SELLP14151 372 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 HOXB6P17509 224 aaKnown RBP12.2□□□□□ -0.46
MSH5-208ENST00000429846 GNGT1P63211 74 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 SLC35D3Q5M8T2 416 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 KRT74Q7RTS7 529 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 OR8B12Q8NGG6 310 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 THEM6Q8WUY1 208 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 PIGCQ92535 297 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 RNF170Q96K19 258 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 LRGUKQ96M69 825 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 SNTG1Q9NSN8 517 aa12.2□□□□□ -0.46
MSH5-208ENST00000429846 TET2Q6N021 2002 aaPredicted RBP12.2□□□□□ -0.46
MSH5-208ENST00000429846 TRBV23-1A0A0A0MS06 115 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 MEIOCA2RUB1 952 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 OR2AT4A6NND4 320 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 SELENOFO60613 162 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 CST1P01037 141 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 HMGN1P05114 100 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 ATP6V1B1P15313 513 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 NDUFB7P17568 137 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 GLRA1P23415 457 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 GMFBP60983 142 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 MS4A2Q01362 244 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 KLRD1Q13241 179 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 DGUOKQ16854 277 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 PLBD1Q6P4A8 553 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 BEND2Q8NDZ0 799 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 OR5D13Q8NGL4 314 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 FAM81AQ8TBF8 368 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 LYZL4Q96KX0 146 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 LRP12Q9Y561 859 aa12.19□□□□□ -0.46
MSH5-208ENST00000429846 A0A0U1RQV5 110 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 ANKRD61A6NGH8 418 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 ACOD1A6NK06 481 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 CALB2P22676 271 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 POU1F1P28069 291 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 MAP2K3P46734 347 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 GPM6AP51674 278 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 GNG3P63215 75 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 GINS1Q14691 196 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 CEACAM21Q3KPI0 293 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 C11orf88Q6PI97 169 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 DEGS2Q6QHC5 323 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 KRT77Q7Z794 578 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 NSL1Q96IY1 281 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 TEX12Q9BXU0 123 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 FGF23Q9GZV9 251 aaPredicted RBP12.18□□□□□ -0.46
MSH5-208ENST00000429846 ZNF556Q9HAH1 456 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 FBLN5Q9UBX5 448 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 LAMP5Q9UJQ1 280 aa12.18□□□□□ -0.46
MSH5-208ENST00000429846 SF3B6Q9Y3B4 125 aaKnown RBP12.18□□□□□ -0.46
MSH5-208ENST00000429846 OR5B21A6NL26 309 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 TSPAN15O95858 294 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 OSMP13725 252 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 ALOX5APP20292 161 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 RPS7P62081 194 aaKnown RBP12.17□□□□□ -0.46
MSH5-208ENST00000429846 EGR3Q06889 387 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 ZBTB37Q5TC79 503 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 KCTD18Q6PI47 426 aaPredicted RBP12.17□□□□□ -0.46
MSH5-208ENST00000429846 CPOQ8IVL8 374 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 TMEM185AQ8NFB2 350 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 ZNF671Q8TAW3 534 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 DUS3LQ96G46 650 aaKnown RBP12.17□□□□□ -0.46
MSH5-208ENST00000429846 CHID1Q9BWS9 393 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 MROQ9BYG7 248 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 YIPF3Q9GZM5 350 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 FAM234AQ9H0X4 552 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 OR51I2Q9H344 312 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 RAB18Q9NP72 206 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 RASL12Q9NYN1 266 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 ZNF222Q9UK12 451 aa12.17□□□□□ -0.46
MSH5-208ENST00000429846 IGKV1D-17A0A075B6S4 117 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 A0A1W2PPH5 198 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 A0A1W2PRD5 423 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 A0A1W2PRF3 423 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 A0A1W2PRM7 423 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 ZNF732B4DXR9 585 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 H0YAE9 185 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 H3BUX3 64 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 GNGT2O14610 69 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 RHBDL1O75783 438 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 PSG2P11465 335 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 SLC2A5P22732 501 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 GABRA5P31644 462 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 GABRA2P47869 451 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 DLX1P56177 255 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 CDK5Q00535 292 aa12.16□□□□□ -0.46
MSH5-208ENST00000429846 PRB3Q04118 309 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms