RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 BCL2P10415 239 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 SNRPBP14678 240 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 EPHA8P29322 1005 aaPredicted RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 CDKN2AP42771 156 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 RGRP47804 291 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 MELKQ14680 651 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 ZNF776Q68DI1 518 aaPredicted RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 VASH2Q86V25 355 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 CYB561A3Q8NBI2 242 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 OR5AR1Q8NGP9 310 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 ZMYND19Q96E35 227 aaPredicted RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 GAS2L1Q99501 681 aaPredicted RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 B3GAT2Q9NPZ5 323 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 LHX6Q9UPM6 363 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 LSM2Q9Y333 95 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 TRAPPC1Q9Y5R8 145 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 HTR5AP47898 357 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 C2orf27AQ580R0 203 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 JMJD6Q6NYC1 403 aaPredicted RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 ERN2Q76MJ5 926 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 EID2BQ96D98 161 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 PYCARD-AS1I3L0S3 204 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 GALR1P47211 349 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 PFN3P60673 137 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 C10orf91Q5T1B1 145 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 OR11G2Q8NGC1 345 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 NUDT8Q8WV74 236 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 EGLN1Q9GZT9 426 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 AUNIPQ9H7T9 357 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 PLEKHF2Q9H8W4 249 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 NECAP2Q9NVZ3 263 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 ATXN7L1Q9ULK2 861 aaPredicted RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 PTRH2Q9Y3E5 179 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 CHST2Q9Y4C5 530 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 LSM5Q9Y4Y9 91 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 IGHV1-69-2A0A0G2JMI3 117 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 IGLON5A6NGN9 336 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 ZNF860A6NHJ4 632 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 FRS3O43559 492 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 CYC1P08574 325 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 AMTP48728 403 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 OR8G2PQ6IF36 304 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 CHST14Q8NCH0 376 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 RAB37Q96AX2 223 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 OR1A2Q9Y585 309 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 RPL13AP40429 203 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 SLC19A1P41440 591 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 DAP3P51398 398 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 GPNMBQ14956 572 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 TP53I3Q53FA7 332 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 MRGPRX3Q96LB0 322 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 CALHM2Q9HA72 323 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 TRAV1-1A0A0B4J248 108 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 CD200P41217 278 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 FAM24BQ8N5W8 94 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 MBNL1Q9NR56 388 aaKnown RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 TRBV24-1A0A075B6N3 115 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 NSG1A0A0A6YYJ2 146 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 SOX1O00570 391 aaPredicted RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 FGF16O43320 207 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 ZFPL1O95159 310 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 OR5G3P0C626 314 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 SMIM17P0DL12 118 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 CMTM4Q8IZR5 234 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 PTPMT1Q8WUK0 201 aaPredicted RBP6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 ZNF480Q8WV37 535 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 APH1AQ96BI3 265 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 DNAJA3Q96EY1 480 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 ABHD6Q9BV23 337 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 MED20Q9H944 212 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 TUBD1Q9UJT1 453 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 OR51B2Q9Y5P1 312 aa6.8□□□□□ -1.32
SYNPO2-202ENST00000429713 TSPAN2O60636 221 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 HSBP1O75506 76 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 MRPS34P82930 218 aaKnown RBP6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 DUSP8Q13202 625 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 PRAMEF20Q5VT98 475 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 ZNF787Q6DD87 383 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 SLC25A18Q9H1K4 315 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 IKZF5Q9H5V7 419 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 TIMM10BQ9Y5J6 103 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 TRAV27A0A087WT01 109 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 APOA2P02652 100 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 EDN3P14138 238 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 CXCL3P19876 107 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 THBS2P35442 1172 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 GAB1Q13480 694 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 PMVKQ15126 192 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 CNN3Q15417 329 aaKnown RBP6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 TMEM25Q86YD3 366 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 C17orf78Q8N4C9 275 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 ZNF511Q8NB15 262 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 SMIM14Q96QK8 99 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 KLF16Q9BXK1 252 aaPredicted RBP6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 PLEKHA3Q9HB20 300 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 CEACAM6P40199 344 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 PDX1P52945 283 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 OR7A5Q15622 319 aa6.79□□□□□ -1.32
SYNPO2-202ENST00000429713 ZNF100Q8IYN0 542 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms