RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 RHEBQ15382 184 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 MRM1Q6IN84 353 aaKnown RBP9.46□□□□□ -0.9
TCOF1-204ENST00000427724 OR4D10Q8NGI6 311 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 SMIM4Q8WVI0 70 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 WDR89Q96FK6 387 aaPredicted RBP9.46□□□□□ -0.9
TCOF1-204ENST00000427724 TXNIPQ9H3M7 391 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 CGGBP1Q9UFW8 167 aaPredicted RBP9.46□□□□□ -0.9
TCOF1-204ENST00000427724 LAMP3Q9UQV4 416 aa9.46□□□□□ -0.9
TCOF1-204ENST00000427724 TMEM82A0PJX8 343 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 GPR31O00270 319 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SEMA7AO75326 666 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SLC34A2O95436 690 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 TSPAN15O95858 294 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 PLA2G5P39877 138 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 RNLSQ5VYX0 342 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 LINC01560Q8TB33 94 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 PTP4A1Q93096 173 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 C20orf24Q9BUV8 137 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 OPN3Q9H1Y3 402 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SULT1C2O00338 296 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 BET1O15155 118 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 HOXD4P09016 255 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-204ENST00000427724 CALCBP10092 127 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 RAB13P51153 203 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 FXYD4P59646 89 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 OR2B8PP59922 312 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 LINC00303Q3SY05 128 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 LAMTOR1Q6IAA8 161 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 ZAR1Q86SH2 424 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 NAA40Q86UY6 237 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SYS1Q8N2H4 156 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF721Q8TF20 911 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 HAS2Q92819 552 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 TOMM40LQ969M1 308 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SLC26A1Q9H2B4 701 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 ADGRL4Q9HBW9 690 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 GLRX2Q9NS18 164 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 TREM2Q9NZC2 230 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 PIGLQ9Y2B2 252 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SLC22A23A1A5C7 686 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 TMEM212A6NML5 194 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 GLRA1P23415 457 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 ADH6P28332 368 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 CX3CR1P49238 355 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 ATP5J2P56134 94 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 FUT5Q11128 374 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SLC25A30Q5SVS4 291 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 GLYATL3Q5SZD4 288 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 STEAP1BQ6NZ63 245 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 TMPRSS11FQ6ZWK6 438 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 CBLN2Q8IUK8 224 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 CSNK2A3Q8NEV1 391 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 BPIFCQ8NFQ6 507 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 PHB2Q99623 299 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 RTL8AQ9BWD3 113 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 NTMQ9P121 344 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 KCNMB2Q9Y691 235 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 ABCA2Q9BZC7 2435 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 NTN3O00634 580 aaPredicted RBP9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SELEP16581 610 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 CPT2P23786 658 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 MMP15P51511 669 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 TAS2R19P59542 299 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 ZNF674Q2M3X9 581 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 Q6ZTK2 550 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SLC16A9Q7RTY1 509 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 RAB1CQ92928 201 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 FAM3DQ96BQ1 224 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SIGLEC12Q96PQ1 595 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 SMIM3Q9BZL3 60 aa9.45□□□□□ -0.9
TCOF1-204ENST00000427724 CACNA1DQ01668 2161 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 FITM1A5D6W6 292 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 TMEM229AB2RXF0 380 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 MED6O75586 246 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 RTP5Q14D33 572 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 ETFDHQ16134 617 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 FAM209BQ5JX69 171 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 LCN10Q6JVE6 187 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 DGAT2L6Q6ZPD8 337 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 BVESQ8NE79 360 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 TMED6Q8WW62 240 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 PHYHIPQ92561 330 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 TAAR8Q969N4 342 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 FOXRED1Q96CU9 486 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-204ENST00000427724 SLAMF6Q96DU3 332 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 SULT4A1Q9BR01 284 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 TMEM8BA6NDV4 472 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 MCRIP1C9JLW8 97 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 IFNA17P01571 189 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 IGHA1P01876 353 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 CT45A8P0DMV1 189 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 CT45A9P0DMV2 189 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 NME2P22392 152 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 SDHAP31040 664 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 GRB2P62993 217 aaKnown RBP9.44□□□□□ -0.9
TCOF1-204ENST00000427724 SHBQ15464 509 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 IGFBP7Q16270 282 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 PLEKHN1Q494U1 663 aaPredicted RBP9.44□□□□□ -0.9
TCOF1-204ENST00000427724 CT45A2Q5DJT8 189 aa9.44□□□□□ -0.9
TCOF1-204ENST00000427724 OR2T2Q6IF00 324 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms