RNA–Protein interactions for RNA: ENST00000425393.1

RAB3GAP1-202, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2 BASIC

Gene RAB3GAP1, Length 1,139 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-202ENST00000425393 C1orf50Q9BV19 199 aa2.3□□□□□ -2.04
RAB3GAP1-202ENST00000425393 CA10Q9NS85 328 aa2.3□□□□□ -2.04
RAB3GAP1-202ENST00000425393 DDX18Q9NVP1 670 aaKnown RBP2.3□□□□□ -2.04
RAB3GAP1-202ENST00000425393 TOP2BQ02880 1626 aa2.3□□□□□ -2.04
RAB3GAP1-202ENST00000425393 LAMC3Q9Y6N6 1575 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 ZNF608Q9ULD9 1512 aaPredicted RBP2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 NCAPD3P42695 1498 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 RPRD2Q5VT52 1461 aaKnown RBP2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 ARPC4-TTLL3A0A0A6YYG9 625 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 PRAMEF26H0Y7S4 382 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 HSBP1O75506 76 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 UPK1BO75841 260 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 SCO1O75880 301 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 LCA5LO95447 670 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 FSTL3O95633 263 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 IGKV1-39P01597 117 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 IGKV1D-39P04432 117 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 YWHAEP62258 255 aaKnown RBP2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 TSC22D1Q15714 1073 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 LINC00303Q3SY05 128 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 FAM104BQ5XKR9 115 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 ULK3Q6PHR2 472 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 NT5DC3Q86UY8 548 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 RNF10Q8N5U6 811 aaKnown RBP2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 WDR31Q8NA23 367 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 OR10Z1Q8NGY1 313 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 ANGPTL4Q9BY76 406 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 IL22Q9GZX6 179 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 SHANK1Q9Y566 2161 aa2.29□□□□□ -2.04
RAB3GAP1-202ENST00000425393 PLEKHG2Q9H7P9 1386 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 A8MWL6 223 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 HACD1B0YJ81 288 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 ZNF701M0R085 212 aaPredicted RBP2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 MFNGO00587 321 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 TRDMT1O14717 391 aaKnown RBP2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 TTC4O95801 387 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 MMP7P09237 267 aaPredicted RBP2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 GABRR2P28476 465 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 PRSS3P35030 304 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 CFHR2P36980 270 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 PPP1CAP62136 330 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 RPS11P62280 158 aaKnown RBP eCLIP2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 LCN2P80188 198 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 BTN1A1Q13410 526 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 OR4M2Q8NGB6 313 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 CERS2Q96G23 380 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 SNF8Q96H20 258 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 ZBED3Q96IU2 234 aaPredicted RBP2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 ALS2CR12Q96Q35 445 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 NAPGQ99747 312 aaPredicted RBP2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 ZNF649Q9BS31 505 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 TMEM175Q9BSA9 504 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 ARV1Q9H2C2 271 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 BLZF1Q9H2G9 400 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 CRLF2Q9HC73 371 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 DDX19BQ9UMR2 479 aa2.28□□□□□ -2.04
RAB3GAP1-202ENST00000425393 SHROOM3Q8TF72 1996 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 SBNO1A3KN83 1393 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 TMEM72A0PK05 275 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 MAS1P04201 325 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 INAFM2P0DMQ5 153 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 SRMP19623 302 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 CSKP41240 450 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 ZNF235Q14590 738 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 ZNF678Q5SXM1 525 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 OR2W3Q7Z3T1 314 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 ZCCHC24Q8N2G6 241 aaKnown RBP2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 OR2M7Q8NG81 312 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 OR1S1Q8NH92 325 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 BAALCQ8WXS3 180 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 TMEM234Q8WY98 164 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 OR8D1Q8WZ84 308 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 MRPL48Q96GC5 212 aaKnown RBP2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 RABL2AQ9UBK7 228 aaPredicted RBP2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 NDRG2Q9UN36 371 aaKnown RBP2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 KLF12Q9Y4X4 402 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 SIGLEC1Q9BZZ2 1709 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 UNC13AQ9UPW8 1703 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 SEC16AO15027 2179 aa2.27□□□□□ -2.05
RAB3GAP1-202ENST00000425393 MRC2Q9UBG0 1479 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 ISPDA4D126 451 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 IGLV7-43P04211 117 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 P0C880 135 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 PMCHP20382 165 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 CD34P28906 385 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 MPIP34949 423 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 GALR1P47211 349 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 TGM4P49221 684 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 TMEM69Q5SWH9 247 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 SLC35D2Q76EJ3 337 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 BBS7Q8IWZ6 715 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 SLC7A5P1Q8MH63 180 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 TMEM104Q8NE00 496 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 PIH1D2Q8WWB5 315 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 TOP1MTQ969P6 601 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 PDCD1LG2Q9BQ51 273 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 MS4A8Q9BY19 250 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 STMN4Q9H169 189 aaPredicted RBP2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 RGCCQ9H4X1 137 aa2.26□□□□□ -2.05
RAB3GAP1-202ENST00000425393 CYP3A43Q9HB55 503 aa2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms