RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 MLXQ9UH92 298 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 SHPKQ9UHJ6 478 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 PRO0628Q9UI54 55 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF225Q9UK10 706 aa3□□□□□ -1.93
SF3B1-205ENST00000424674 IGHV1OR21-1A0A087WYE8 117 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 TGIF2-C20orf24A0A0A6YYL0 155 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 TRABD2BA6NFA1 517 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 IGLON5A6NGN9 336 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 C15orf61A6NNL5 157 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 E9PLD3 99 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 ARPC5O15511 151 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 FRAT2O75474 233 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-205ENST00000424674 RP2O75695 350 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 CCNKO75909 580 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 VENTXO95231 258 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 PTHP01270 115 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 PRSS1P07477 247 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 PRSS2P07478 247 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 SLC35G6P0C7Q6 338 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 FAM228BP0C875 321 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 TCP1P17987 556 aaKnown RBP2.99□□□□□ -1.93
SF3B1-205ENST00000424674 ATF1P18846 271 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 HIST1H1TP22492 207 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-205ENST00000424674 S100GP29377 79 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 CCR7P32248 378 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 OPRL1P41146 370 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 PPICP45877 212 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 GPR6P46095 362 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-205ENST00000424674 GCLMP48507 274 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 PDLIM4P50479 330 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 CDKN2DP55273 166 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 TAS2R41P59536 307 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 ERVFC1-1P60608 527 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 SNAP25P60880 206 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 NUTF2P61970 127 aaKnown RBP2.99□□□□□ -1.93
SF3B1-205ENST00000424674 HIST1H3AP68431 136 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 H3F3AP84243 136 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 BAXQ07812 192 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 APOFQ13790 326 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF235Q14590 738 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 OR1Q1Q15612 314 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 PRSS8Q16651 343 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 WHAMMP3Q1A5X7 153 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 LRRC36Q1X8D7 754 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 NSUN5P1Q3KNT7 163 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 TMEM30BQ3MIR4 351 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 PAGE3Q5JUK9 113 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 MUC21Q5SSG8 566 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF790Q6PG37 636 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 C5orf46Q6UWT4 87 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 RASSF6Q6ZTQ3 369 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 HIST2H3AQ71DI3 136 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 MRPL55Q7Z7F7 128 aaKnown RBP2.99□□□□□ -1.93
SF3B1-205ENST00000424674 GALNT10Q86SR1 603 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 COMMD7Q86VX2 200 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 CATSPER3Q86XQ3 398 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 ARRDC1Q8N5I2 433 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 SLC26A10Q8NG04 563 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 OR10G3Q8NGC4 313 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 OR52E2Q8NGJ4 325 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 OR51G1Q8NGK1 321 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 OR10K1Q8NGX5 313 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 OR13G1Q8NGZ3 307 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 SKA2Q8WVK7 121 aaPredicted RBP2.99□□□□□ -1.93
SF3B1-205ENST00000424674 RDH5Q92781 318 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 TMBIM1Q969X1 311 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 OLFM3Q96PB7 478 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 KIFC1Q9BW19 673 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 SELENOIQ9C0D9 397 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 MIXL1Q9H2W2 232 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 UGT1A8Q9HAW9 530 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 SLC7A10Q9NS82 523 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 THYN1Q9P016 225 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 TMEM181Q9P2C4 612 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 SPRR3Q9UBC9 169 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 RWDD2AQ9UIY3 292 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 ANXA10Q9UJ72 324 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 VPREB3Q9UKI3 123 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 PROCRQ9UNN8 238 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 C14orf166Q9Y224 244 aaKnown RBP2.99□□□□□ -1.93
SF3B1-205ENST00000424674 TP53TG5Q9Y2B4 290 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 KCNE3Q9Y6H6 103 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 CAMSAP1Q5T5Y3 1602 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 NCOA1Q15788 1441 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 NID2Q14112 1375 aa2.99□□□□□ -1.93
SF3B1-205ENST00000424674 TRAV8-4A0A0B4J246 113 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 TRBV5-4A0A0C4DH59 114 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 A0A1B0GVT2 93 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 METTL15A6NJ78 407 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 ZNF705EA8MWA4 302 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-205ENST00000424674 INAFM1C9JVW0 142 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 MFNGO00587 321 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 TNFRSF13BO14836 293 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-205ENST00000424674 OR7C1O76099 320 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-205ENST00000424674 S1PR2O95136 353 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 KLF8O95600 359 aaPredicted RBP2.98□□□□□ -1.93
SF3B1-205ENST00000424674 CRYZL1O95825 349 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 SLC25A27O95847 323 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 RENP00797 406 aa2.98□□□□□ -1.93
SF3B1-205ENST00000424674 P01737 135 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms