RNA–Protein interactions for RNA: ENST00000424265.5

USP54-205, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 5,201 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-205ENST00000424265 UBE2V1Q13404 147 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 SHISA6Q6ZSJ9 500 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 OR2L13Q8N349 312 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 HAVCR2Q8TDQ0 301 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 SLC38A5Q8WUX1 472 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 NUDT8Q8WV74 236 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 OR5B12Q96R08 314 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 LRFN1Q9P244 771 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 G3V3Q6 166 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 GZMBP10144 247 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 CEACAM1P13688 526 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 MPZP25189 248 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 SUMO3P55854 103 aaPredicted RBP8.76□□□□□ -1.01
USP54-205ENST00000424265 SLC17A1Q14916 467 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 EBPQ15125 230 aaKnown RBP8.76□□□□□ -1.01
USP54-205ENST00000424265 ZNF385BQ569K4 471 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 OR2Y1Q8NGV0 311 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 ZNF700Q9H0M5 742 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 SLC52A3Q9NQ40 469 aa8.76□□□□□ -1.01
USP54-205ENST00000424265 FAM227AF5H4B4 570 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 KLRC4-KLRK1H3BQV0 150 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 M0QZ24 198 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 SELEP16581 610 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 SOX18P35713 384 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 RAB31Q13636 194 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 NNATQ16517 81 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 ALG10BQ5I7T1 473 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 HEPN1Q6WQI6 88 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 OR10W1Q8NGF6 305 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 OR4D6Q8NGJ1 314 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 LGALS14Q8TCE9 139 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 ORAOV1Q8WV07 137 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 FSCN3Q9NQT6 498 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 C2orf16Q68DN1 1984 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 VAMP5O95183 116 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 HLA-AP01891 365 aaKnown RBP8.75□□□□□ -1.01
USP54-205ENST00000424265 HLA-DQA2P01906 255 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 PGA3P0DJD8 388 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 MYF5P13349 255 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 SLC37A1P57057 533 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 OR11L1Q8NGX0 322 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 KCNE4Q8WWG9 221 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 CNRIP1Q96F85 164 aaPredicted RBP8.75□□□□□ -1.01
USP54-205ENST00000424265 ADOQ96SZ5 270 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 NIPSNAP3BQ9BS92 247 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 KCNE5Q9UJ90 142 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 AMDHD2Q9Y303 409 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 SDK1Q7Z5N4 2213 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 NPIPA5E9PKD4 350 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 K7EP13 123 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 FTH1P19P0C7X4 201 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 CCNOP22674 350 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 CYB561P49447 251 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 UCNP55089 124 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 CSNK2A1P68400 391 aaPredicted RBP8.75□□□□□ -1.01
USP54-205ENST00000424265 FBLN7Q53RD9 439 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 VWA2Q5GFL6 755 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 MMP21Q8N119 569 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 AMER3Q8N944 861 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 OR4A4PQ8NGN8 299 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 MAL2Q969L2 176 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 TBX15Q96SF7 602 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 PCGF1Q9BSM1 259 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 NPIPA1Q9UND3 350 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 CSAG2Q9Y5P2 127 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 GABRA2P47869 451 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 NIPAL3Q6P499 406 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 CPOQ8IVL8 374 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 CMTM1Q8IZ96 169 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 OR1P1Q8NH06 330 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 THAP4Q8WY91 577 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 PIK3IP1Q96FE7 263 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 MSL2Q9HCI7 577 aa8.75□□□□□ -1.01
USP54-205ENST00000424265 GFRA3O60609 400 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 WDR1O75083 606 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 UTS2O95399 124 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 LCATP04180 440 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 CD79AP11912 226 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 SOX8P57073 446 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 SLAQ13239 276 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 PWWP2BQ6NUJ5 590 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 ZADH2Q8N4Q0 377 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 MIEN1Q9BRT3 115 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 VN1R1Q9GZP7 353 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 SLC35B3Q9H1N7 401 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 CNIH4Q9P003 139 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 KLF13Q9Y2Y9 288 aaPredicted RBP8.74□□□□□ -1.01
USP54-205ENST00000424265 ANKRD36A6QL64 1941 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 FAM183AA6NL82 134 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 ZNF814B7Z6K7 855 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 NME2P1O60361 137 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 SLC25A4P12235 298 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 NID1P14543 1247 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 BMP5P22003 454 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 LIMS1P48059 325 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 SYPL1Q16563 259 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 OR5W2Q8NH69 310 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 SYNPRQ8TBG9 265 aa8.74□□□□□ -1.01
USP54-205ENST00000424265 SLC25A43Q8WUT9 341 aaPredicted RBP8.74□□□□□ -1.01
USP54-205ENST00000424265 LRFN3Q9BTN0 628 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms