RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 HIST1H3AP68431 136 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 FOXF1Q12946 379 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 KISS1Q15726 138 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 IAH1Q2TAA2 248 aaPredicted RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 HIST2H3PS2Q5TEC6 136 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 CRIP3Q6Q6R5 217 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 HIST2H3AQ71DI3 136 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 BHLHE23Q8NDY6 225 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 WNT2BQ93097 391 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 POM121Q96HA1 1249 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 SHDQ96IW2 340 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 GPER1Q99527 375 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 BANF2Q9H503 90 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 LMAN1LQ9HAT1 526 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 PLA2G2EQ9NZK7 142 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 DHCR7Q9UBM7 475 aaKnown RBP13.39□□□□□ -0.27
C9orf3-204ENST00000424143 FBXL17Q9UF56 701 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 HSF4Q9ULV5 492 aa13.39□□□□□ -0.27
C9orf3-204ENST00000424143 BORCS7-ASMTA0A0B4J1R7 106 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 TLX3O43711 291 aaPredicted RBP13.38□□□□□ -0.27
C9orf3-204ENST00000424143 EFNA2O43921 213 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 NME2P22392 152 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 DTYMKP23919 212 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 CD38P28907 300 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 CD80P33681 288 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 SNCAP37840 140 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 MYBPHQ13203 477 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 RHEBQ15382 184 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 PLPPR5Q32ZL2 321 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 Q6ZRG5 221 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 RTN4RL2Q86UN3 420 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 C1QL4Q86Z23 238 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 LFNGQ8NES3 379 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 OR5L2Q8NGL0 311 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 ZNF319Q9P2F9 582 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 POLR1DQ9Y2S0 133 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 HDGFL3Q9Y3E1 203 aa13.38□□□□□ -0.27
C9orf3-204ENST00000424143 GPR137BO60478 399 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 HPNP05981 417 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 HOXB5P09067 269 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 BLVRBP30043 206 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-204ENST00000424143 GLP1RP43220 463 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 ZNF41P51814 821 aaPredicted RBP13.37□□□□□ -0.27
C9orf3-204ENST00000424143 TMEM33P57088 247 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 S100A10P60903 97 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 HNRNPKP61978 463 aaKnown RBP eCLIP13.37□□□□□ -0.27
C9orf3-204ENST00000424143 RNF144BQ7Z419 303 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 SULF2Q8IWU5 870 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 APCDD1LQ8NCL9 501 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 OR8G5Q8NG78 346 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 POC1BQ8TC44 478 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 HAS2Q92819 552 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 ST6GALNAC5Q9BVH7 336 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 SUCNR1Q9BXA5 334 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 CHST5Q9GZS9 411 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 GSKIPQ9P0R6 139 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 LUZP4Q9P127 313 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 KCNIP3Q9Y2W7 256 aa13.37□□□□□ -0.27
C9orf3-204ENST00000424143 IGHV1OR21-1A0A087WYE8 117 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 SHISA7A6NL88 538 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 C9JQL5 133 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 H7C1Q1 480 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 DHRS3O75911 302 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 TSPAN15O95858 294 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 ONECUT2O95948 504 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 SERPINA5P05154 406 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 SFTPBP07988 381 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 CYC1P08574 325 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 ZNF43P17038 809 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 P2RY1P47900 373 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 FBXW4P57775 412 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 STARD6P59095 220 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 IL13RA2Q14627 380 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 EIF2S3LQ2VIR3 472 aaKnown RBP13.36□□□□□ -0.27
C9orf3-204ENST00000424143 C10orf128Q5T292 105 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 RABEPKQ7Z6M1 372 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 CPNE2Q96FN4 548 aaPredicted RBP13.36□□□□□ -0.27
C9orf3-204ENST00000424143 EMC6Q9BV81 110 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 SLC7A5P2Q9GIP4 190 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 PCDH15Q96QU1 1955 aa13.36□□□□□ -0.27
C9orf3-204ENST00000424143 IGHV2-5P01817 119 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 OTX1P32242 354 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-204ENST00000424143 EIF1P41567 113 aaKnown RBP13.35□□□□□ -0.27
C9orf3-204ENST00000424143 UCP3P55916 312 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 ACY1Q03154 408 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 SMAD2Q15796 467 aaKnown RBP13.35□□□□□ -0.27
C9orf3-204ENST00000424143 GGNBP1Q5YKI7 109 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 ASCL4Q6XD76 172 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 SYT13Q7L8C5 426 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 ANKRD37Q7Z713 158 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 ZNF283Q8N7M2 679 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 SEMA6DQ8NFY4 1073 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 NTNG2Q96CW9 530 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 ZNF501Q96CX3 271 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-204ENST00000424143 C14orf79Q96F83 325 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 FAM71F1Q96KD3 344 aaPredicted RBP13.35□□□□□ -0.27
C9orf3-204ENST00000424143 ANGPTL4Q9BY76 406 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 EPOPA6NHQ4 379 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 AQP7P3A6NL99 342 aa13.35□□□□□ -0.27
C9orf3-204ENST00000424143 ZNF726A6NNF4 738 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms