RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TTC32Q5I0X7 151 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 UBE2UQ5VVX9 321 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 MRPL14Q6P1L8 145 aaKnown RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 METAP1DQ6UB28 335 aaPredicted RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 KBTBD8Q8NFY9 601 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 RHOXF1Q8NHV9 184 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 RCN3Q96D15 328 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 NSMCE2Q96MF7 247 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 SF3B5Q9BWJ5 86 aaKnown RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 PITPNM3Q9BZ71 974 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 C14orf166Q9Y224 244 aaKnown RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 POMT1Q9Y6A1 747 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 LTBP2Q14767 1821 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 PLXNB1O43157 2135 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 HUWE1Q7Z6Z7 4374 aaKnown RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 CPSF4LA6NMK7 179 aaKnown RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 E7ESA3 106 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 ATP6V1G2-DDX39BF2Z307 99 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 FAM229AH3BQW9 127 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 UBE2L6O14933 153 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 BCHEP06276 602 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 OR8U9P0C7N5 309 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 ARAFP10398 606 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 HTN1P15515 57 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 STOMP27105 288 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 MAPK3P27361 379 aaPredicted RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 PPOXP50336 477 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 PRKXP51817 358 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 AKR1C2P52895 323 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 HMGA2P52926 109 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 CRYBA2P53672 197 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 EMP1P54849 157 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 CDKN2DP55273 166 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 LIM2P55344 173 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 BTG1P62324 171 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 WDR73Q6P4I2 378 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 OR2W3Q7Z3T1 314 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 CRIPAKQ8N1N5 446 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 C17orf47Q8NEP4 570 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 OR2AK2Q8NG84 335 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 OR7G3Q8NG95 312 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 OR52N2Q8NGI0 321 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 EDARADDQ8WWZ3 215 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 SNAPC3Q92966 411 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 ADIPOR1Q96A54 375 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 CNBD2Q96M20 576 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 LAT2Q9GZY6 243 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 GSX1Q9H4S2 264 aaPredicted RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 PIF1Q9H611 641 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 SEBOXQ9HB31 216 aaPredicted RBP3.1□□□□□ -1.91
TOP2A-201ENST00000423485 SPACA1Q9HBV2 294 aa3.1□□□□□ -1.91
TOP2A-201ENST00000423485 CMYA5Q8N3K9 4069 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 IGHV3-15A0A0B4J1V0 119 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 A0A0G2JPF8 293 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 WIPF3A6NGB9 483 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 OR51F1A6NGY5 319 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 HNRNPCL3B7ZW38 293 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 ALG1L2C9J202 215 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 ICOSLGO75144 302 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 ZNF254O75437 659 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 SLC16A8O95907 504 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 GLAP06280 429 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 HNRNPCL4P0DMR1 293 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 RAP2AP10114 183 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 CBR1P16152 277 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 ACKR3P25106 362 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 PSMB5P28074 263 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 RAB7AP51149 207 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 RAP2BP61225 183 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 ZXDBP98169 803 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 TIAL1Q01085 375 aaKnown RBP eCLIP3.09□□□□□ -1.91
TOP2A-201ENST00000423485 SLC9A3R2Q15599 337 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 C3orf36Q3SXR2 165 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 ZFP69Q49AA0 526 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 FAM111BQ6SJ93 734 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 UNQ5815/PRO19632Q6UWF5 114 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 WDR88Q6ZMY6 472 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 GALNT10Q86SR1 603 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 GBGT1Q8N5D6 347 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 ZIC4Q8N9L1 334 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 IL1F10Q8WWZ1 152 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 OR2A5Q96R48 311 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 NEURL2Q9BR09 285 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 WACQ9BTA9 647 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 POLR2J2Q9GZM3 115 aaKnown RBP3.09□□□□□ -1.91
TOP2A-201ENST00000423485 POLR2J3Q9H1A7 115 aaKnown RBP3.09□□□□□ -1.91
TOP2A-201ENST00000423485 SCPEP1Q9HB40 452 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 VNN3Q9NY84 501 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 GSTK1Q9Y2Q3 226 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 HILPDAQ9Y5L2 63 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 NCKAP5O14513 1909 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 DNAH1Q9P2D7 4330 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 E9PI62 339 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 TO15178 435 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 S100A8P05109 93 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 ZDHHC11BP0C7U3 371 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 CT45A10P0DMU9 189 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 PRTN3P24158 256 aa3.09□□□□□ -1.91
TOP2A-201ENST00000423485 FAUP35544 74 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms