RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 A6NJ64 397 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 VSTM5A8MXK1 200 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 PTBP3O95758 552 aaKnown RBP12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 ACAA1P09110 424 aaPredicted RBP12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 SLC2A2P11168 524 aaPredicted RBP12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 RAB6AP20340 208 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 TNFSF8P32971 234 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 PTGFRP43088 359 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZP1P60852 638 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 QRFPP83859 136 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 BSPH1Q075Z2 132 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 PRDX4Q13162 271 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 SNTB2Q13425 540 aaKnown RBP12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 FAM189A2Q15884 450 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 HIST2H2BCQ6DN03 193 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR2T2Q6IF00 324 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR2W3Q7Z3T1 314 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 PNLDC1Q8NA58 520 aaKnown RBP12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 Q8NFD4 153 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 PXT1Q8NFP0 134 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 SYNPRQ8TBG9 265 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 TRMT10AQ8TBZ6 339 aaKnown RBP12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 FAM3DQ96BQ1 224 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 PLGRKTQ9HBL7 147 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 HMG20AQ9NP66 347 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 CA10Q9NS85 328 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 IL36GQ9NZH8 169 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR5V1Q9UGF6 321 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 KLF2Q9Y5W3 355 aaPredicted RBP12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 CRYBG3Q68DQ2 2970 aa12.19□□□□□ -0.46
SHMT1P1-201ENST00000419974 CLDN25C9JDP6 229 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 ATP6V1G2-DDX39BF2Z307 99 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 ABCD4O14678 606 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZNF780AO75290 641 aaPredicted RBP12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 HCKP08631 526 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 ARSBP15848 533 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 GRNP28799 593 aaKnown RBP12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 MPV17P39210 176 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 MNDAP41218 407 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 MMP15P51511 669 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 ATP1B3P54709 279 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 SELENOVP59797 346 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 ERVS71-1P61550 626 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 GNG3P63215 75 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 MZT1Q08AG7 82 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 TMEM255AQ5JRV8 349 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 ADAM5Q6NVV9 412 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 TMEM200AQ86VY9 491 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 DMRTC2Q8IXT2 367 aaPredicted RBP12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 MFSD4AQ8N468 514 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 JAGN1Q8N5M9 183 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 CELF2-AS1Q8N7Q2 184 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR4D6Q8NGJ1 314 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 OR13G1Q8NGZ3 307 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 FAM222BQ8WU58 562 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 HPSE2Q8WWQ2 592 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 PIGCQ92535 297 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 MRPL24Q96A35 216 aaKnown RBP12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 BORCS8Q96FH0 119 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 C1orf147Q96MC9 270 aaPredicted RBP12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 HIST1H2AAQ96QV6 131 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 NUDT16L1Q9BRJ7 211 aaKnown RBP12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 PAPOLGQ9BWT3 736 aaKnown RBP12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 WDR12Q9GZL7 423 aaKnown RBP12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 GPR173Q9NS66 373 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 TMEM100Q9NV29 134 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 COMMD3Q9UBI1 195 aa12.18□□□□□ -0.46
SHMT1P1-201ENST00000419974 SMIM30A4D0T7 59 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 TMEM210A6NLX4 147 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZNF850A8MQ14 1090 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 TMEM14DPA8MWL7 114 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 SHISA9B4DS77 424 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 PAHP00439 452 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 CD3EP07766 207 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 ADH4P08319 380 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 OCMP0CE72 109 aaPredicted RBP12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 MPZP25189 248 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 LOXP28300 417 aaPredicted RBP12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 CD40LGP29965 261 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 NR4A2P43354 598 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 MTCP1P56278 107 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 KLF3P57682 345 aaPredicted RBP12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 GPR176Q14439 515 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 DAZAP2Q15038 168 aaPredicted RBP12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 C2orf76Q3KRA6 126 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 UBE2NLQ5JXB2 153 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 SPANXN2Q5MJ10 180 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 SPATA46Q5T0L3 261 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 HES5Q5TA89 166 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 PLCXD3Q63HM9 321 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 BAIAP2L2Q6UXY1 529 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 MOB3CQ70IA8 216 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 ANGPTL5Q86XS5 388 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 LAX1Q8IWV1 398 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZNF671Q8TAW3 534 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 ZFAND2BQ8WV99 257 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 MRPS24Q96EL2 167 aaKnown RBP12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 PKIBQ9C010 78 aa12.17□□□□□ -0.46
SHMT1P1-201ENST00000419974 TLNRD1Q9H1K6 362 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms