RNA–Protein interactions for RNA: ENST00000419110.5

HMGB3-202, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 3

Gene HMGB3, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-202ENST00000419110 SLC25A40Q8TBP6 338 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 FAM46BQ96A09 425 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 RFT1Q96AA3 541 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 HAVCR1Q96D42 359 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 S100A16Q96FQ6 103 aaKnown RBP5.14□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF75AQ96N20 296 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 HIST1H2AAQ96QV6 131 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 SOX7Q9BT81 388 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 URM1Q9BTM9 101 aaKnown RBP5.14□□□□□ -1.59
HMGB3-202ENST00000419110 RTL8AQ9BWD3 113 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 ELL3Q9HB65 397 aaPredicted RBP5.14□□□□□ -1.59
HMGB3-202ENST00000419110 DIABLOQ9NR28 239 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 JKAMPQ9P055 326 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 GHRLQ9UBU3 117 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 OR5V1Q9UGF6 321 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 GPR160Q9UJ42 338 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 MPC1Q9Y5U8 109 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 NBASA2RRP1 2371 aa5.14□□□□□ -1.59
HMGB3-202ENST00000419110 RAI1Q7Z5J4 1906 aaPredicted RBP5.13□□□□□ -1.59
HMGB3-202ENST00000419110 A0A0G2JMP0 313 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 A0A0X1KG70 313 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 FAM230AA0A1W2PPH8 454 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 A0A1W2PQ09 198 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF850A8MQ14 1090 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 IQCF6A8MYZ5 107 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 ATXN7O15265 892 aaPredicted RBP5.13□□□□□ -1.59
HMGB3-202ENST00000419110 CTAG2O75638 210 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 CRTAPO75718 401 aaPredicted RBP5.13□□□□□ -1.59
HMGB3-202ENST00000419110 TPPPO94811 219 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 KDM4BO94953 1096 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 PTTG1O95997 202 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 PLATP00750 562 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 CST4P01036 141 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 IL7P13232 177 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 CPT2P23786 658 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 COL8A1P27658 744 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 MNDAP41218 407 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 OR3A4PP47883 348 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 EVX1P49640 407 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 FUT6P51993 359 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 MTCP1P56278 107 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 TAS2R20P59543 309 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 SORDQ00796 357 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 SCN1BQ07699 218 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 MZT1Q08AG7 82 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 MADCAM1Q13477 382 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 GPR176Q14439 515 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 HLXQ14774 488 aaPredicted RBP5.13□□□□□ -1.59
HMGB3-202ENST00000419110 KISS1Q15726 138 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 TRIM16LQ309B1 348 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF718Q3SXZ3 478 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 FBXL19-AS1Q494R0 122 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 FAM166AQ6J272 317 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 RGS7BPQ6MZT1 257 aaPredicted RBP5.13□□□□□ -1.59
HMGB3-202ENST00000419110 ALKBH2Q6NS38 261 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 GLIPR1L1Q6UWM5 242 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 SEZ6L2Q6UXD5 910 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM108Q6UXF1 575 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 MOB3CQ70IA8 216 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 FJX1Q86VR8 437 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 WFDC8Q8IUA0 241 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 SNX29P2Q8IUI4 249 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 CMTM4Q8IZR5 234 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 GALNT11Q8NCW6 608 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 C19orf18Q8NEA5 215 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 OR4M2Q8NGB6 313 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 OR4D6Q8NGJ1 314 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 OR5D18Q8NGL1 313 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 OR8S1Q8NH09 359 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 KCNG3Q8TAE7 436 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 SMIM4Q8WVI0 70 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 PIGCQ92535 297 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 RNASE6Q93091 150 aaKnown RBP5.13□□□□□ -1.59
HMGB3-202ENST00000419110 PTX4Q96A99 478 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 CCDC120Q96HB5 630 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 SPACA5Q96QH8 159 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 MICU1Q9BPX6 476 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 OR2J1Q9GZK6 312 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 SLC22A4Q9H015 551 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 ATG5Q9H1Y0 275 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 ABCG5Q9H222 651 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 KCNK15Q9H427 330 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 POFUT1Q9H488 388 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 CNTD2Q9H8S5 307 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 PCDHB16Q9NRJ7 776 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 NKIRAS2Q9NYR9 191 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 MRPL15Q9P015 296 aaKnown RBP5.13□□□□□ -1.59
HMGB3-202ENST00000419110 FBLN5Q9UBX5 448 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 RAB22AQ9UL26 194 aa5.13□□□□□ -1.59
HMGB3-202ENST00000419110 CADP27708 2225 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 LAMA5O15230 3695 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 IGKV1-9A0A0C4DH69 117 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 TMEM210A6NLX4 147 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ATP6V1G2-DDX39BF2Z307 99 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 J3QT63 122 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 CTDSPLO15194 276 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 XRCC3O43542 346 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 GMDSO60547 372 aa5.12□□□□□ -1.59
HMGB3-202ENST00000419110 ZNF780AO75290 641 aaPredicted RBP5.12□□□□□ -1.59
HMGB3-202ENST00000419110 MPIG6BO95866 241 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms