RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	ZNF404	Q494X3	552 aa		13.71	□□□□□ -0.21
DDR1-231	ENST00000417521	RBM48	Q5RL73	367 aa	Known RBP	13.71	□□□□□ -0.21
DDR1-231	ENST00000417521	SYS1	Q8N2H4	156 aa		13.71	□□□□□ -0.21
DDR1-231	ENST00000417521	NANP	Q8TBE9	248 aa		13.71	□□□□□ -0.21
DDR1-231	ENST00000417521	MYDGF	Q969H8	173 aa		13.71	□□□□□ -0.21
DDR1-231	ENST00000417521	MRPL48	Q96GC5	212 aa	Known RBP	13.71	□□□□□ -0.21
DDR1-231	ENST00000417521	PBOV1	Q9GZY1	135 aa		13.71	□□□□□ -0.21
DDR1-231	ENST00000417521	C14orf119	Q9NWQ9	140 aa		13.71	□□□□□ -0.21
DDR1-231	ENST00000417521	OPN4	Q9UHM6	478 aa		13.71	□□□□□ -0.21
DDR1-231	ENST00000417521	SLC22A13	Q9Y226	551 aa		13.71	□□□□□ -0.21
DDR1-231	ENST00000417521		E9PI62	339 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	TRAPPC2L	H3BP13	241 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	RPS2	P15880	293 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	GSK3A	P49840	483 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	FAM201A	Q5SY85	155 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	KCTD20	Q7Z5Y7	419 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	CSNK2A3	Q8NEV1	391 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	OCEL1	Q9H607	264 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	MMP26	Q9NRE1	261 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	CHCHD3	Q9NX63	227 aa	Known RBP	13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	ZNF391	Q9UJN7	358 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	OR52A1	Q9UKL2	312 aa		13.7	□□□□□ -0.22
DDR1-231	ENST00000417521	ACOD1	A6NK06	481 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	TTR	P02766	147 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	ZNF12	P17014	697 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	BCL2L15	Q5TBC7	163 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	DCDC5	Q6ZRR9	648 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	CATSPERD	Q86XM0	798 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	PRSS35	Q8N3Z0	413 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	FTMT	Q8N4E7	242 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	DEFB108B	Q8NET1	73 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	OR8S1	Q8NH09	359 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	NEIL1	Q96FI4	390 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	LYZL4	Q96KX0	146 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	SSBP3	Q9BWW4	388 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	OR5V1	Q9UGF6	321 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	NUFIP1	Q9UHK0	495 aa	Known RBP	13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	CAB39	Q9Y376	341 aa	Predicted RBP	13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	INSIG2	Q9Y5U4	225 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	SNX5	Q9Y5X3	404 aa		13.69	□□□□□ -0.22
DDR1-231	ENST00000417521	RGS10	O43665	173 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	HTR1A	P08908	422 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	EPHA1	P21709	976 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	KIR3DL2	P43630	455 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	GTF2A1	P52655	376 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	NANOS3	P60323	173 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	SRSF2	Q01130	221 aa	Known RBP	13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	ZNF154	Q13106	437 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	DOC2B	Q14184	412 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	OR8B8	Q15620	311 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	KCNJ8	Q15842	424 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	ODF4	Q2M2E3	257 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	WDR38	Q5JTN6	314 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	XAF1	Q6GPH4	301 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	TMPRSS11A	Q6ZMR5	421 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	NLRC3	Q7RTR2	1065 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	OR8B3	Q8NGG8	313 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	OR2G2	Q8NGZ5	317 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	OR51E1	Q8TCB6	317 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	ZNF418	Q8TF45	676 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	GATAD2B	Q8WXI9	593 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	DVL3	Q92997	716 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	ITFG2	Q969R8	447 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	OR8B2	Q96RD0	313 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	MYCBP	Q99417	103 aa	Predicted RBP	13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	MOB1A	Q9H8S9	216 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	TRIM36	Q9NQ86	728 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	C1orf123	Q9NWV4	160 aa		13.68	□□□□□ -0.22
DDR1-231	ENST00000417521	LGALS8	O00214	317 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	FSHB	P01225	129 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	MT-ND2	P03891	347 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	GRP	P07492	148 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	ADRA2C	P18825	462 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	EEF1B2	P24534	225 aa	Known RBP	13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	GNAL	P38405	381 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	GNB2	P62879	340 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	USP43	Q70EL4	1123 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	COMMD2	Q86X83	199 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	ELMOD2	Q8IZ81	293 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	NANOGP1	Q8N7R0	232 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	ZNF485	Q8NCK3	441 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	OR52N1	Q8NH53	320 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	C19orf24	Q9BVV8	132 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	CDCA4	Q9BXL8	241 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	CCDC90B	Q9GZT6	254 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	GPR84	Q9NQS5	396 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	FRRS1L	Q9P0K9	344 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	BLOC1S6	Q9UL45	172 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	RHBDD3	Q9Y3P4	386 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	MPC1	Q9Y5U8	109 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	AUP1	Q9Y679	476 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521		A0A0U1RQV5	110 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521		H3BSH0	61 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	P2RY10	O00398	339 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	MYL12B	O14950	172 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	NDUFA2	O43678	99 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	DYSF	O75923	2080 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	LALBA	P00709	142 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	LHB	P01229	141 aa		13.67	□□□□□ -0.22
DDR1-231	ENST00000417521	PITPNB	P48739	271 aa		13.67	□□□□□ -0.22

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