RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 FAM89BQ8N5H3 189 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 OR2AE1Q8NHA4 323 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 RNF141Q8WVD5 230 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 SLC26A1Q9H2B4 701 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 TREM1Q9NP99 234 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 TMEM100Q9NV29 134 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 PI4KAP42356 2102 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 FRYQ5TBA9 3013 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 LY6G6EA0A0G2JKS1 128 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 CEACAM18A8MTB9 384 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 AGPAT2O15120 278 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 SIGLEC6O43699 453 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 DKK1O94907 266 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 GUCA1AP43080 201 aaPredicted RBP12.69□□□□□ -0.38
HDAC9-208ENST00000417496 CSNK1A1P48729 337 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 GRB2P62993 217 aaKnown RBP12.69□□□□□ -0.38
HDAC9-208ENST00000417496 CHAF1BQ13112 559 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 PNLIPRP3Q17RR3 467 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 SNAI3Q3KNW1 292 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 CHRFAM7AQ494W8 412 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 RPL7L1Q6DKI1 246 aaKnown RBP12.69□□□□□ -0.38
HDAC9-208ENST00000417496 OR2A2Q6IF42 318 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 PRSS54Q6PEW0 395 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 PPP1R3BQ86XI6 285 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 ADPRHL1Q8NDY3 354 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 SAV1Q9H4B6 383 aaPredicted RBP12.69□□□□□ -0.38
HDAC9-208ENST00000417496 PURGQ9UJV8 347 aaKnown RBP12.69□□□□□ -0.38
HDAC9-208ENST00000417496 U3KQA8 63 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 CEP192Q8TEP8 1941 aa12.69□□□□□ -0.38
HDAC9-208ENST00000417496 RAB19A4D1S5 217 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 GLI4P10075 376 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 CCL3P10147 92 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 MSR1P21757 451 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 KCNMB1Q16558 191 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 MST1LQ2TV78 715 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 RAET1LQ5VY80 246 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 CLEC9AQ6UXN8 241 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 Q7L0L9 218 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 ZNF629Q9UEG4 869 aaPredicted RBP12.68□□□□□ -0.38
HDAC9-208ENST00000417496 FOXI3A8MTJ6 420 aaPredicted RBP12.68□□□□□ -0.38
HDAC9-208ENST00000417496 MSTNO14793 375 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 SERPINA5P05154 406 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 CD63P08962 238 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 PTGER4P35408 488 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 ID4P47928 161 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 SLC35A1P78382 337 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 ACTBL2Q562R1 376 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 UQCC3Q6UW78 93 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 FADS6Q8N9I5 356 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 POC1AQ8NBT0 407 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 S100A13Q99584 98 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 PLEK2Q9NYT0 353 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 HDGFL3Q9Y3E1 203 aa12.68□□□□□ -0.38
HDAC9-208ENST00000417496 PCP4L1A6NKN8 68 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 SPRY1O43609 319 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-208ENST00000417496 TLX3O43711 291 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-208ENST00000417496 LRP3O75074 770 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 FBXO24O75426 580 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 DHRS3O75911 302 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 PATE4P0C8F1 98 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 NAT2P11245 290 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 PRF1P14222 555 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 H3F3AP84243 136 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 SPEM2Q0P670 501 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 CDCP2Q5VXM1 449 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 H3F3CQ6NXT2 135 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 C20orf196Q8IYI0 205 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 SVBPQ8N300 66 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 GJC3Q8NFK1 279 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 SEMA6DQ8NFY4 1073 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 NABP1Q96AH0 204 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 FBXO17Q96EF6 278 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 C2orf50Q96LR7 162 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 NECAB3Q96P71 396 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-208ENST00000417496 ZNF2Q9BSG1 426 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-208ENST00000417496 FAAP24Q9BTP7 215 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 SLC5A7Q9GZV3 580 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 PARP12Q9H0J9 701 aaKnown RBP12.67□□□□□ -0.38
HDAC9-208ENST00000417496 NELFAQ9H3P2 528 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 GPR173Q9NS66 373 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 PLEKHJ1Q9NW61 149 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 HPF1Q9NWY4 346 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 MRPS17Q9Y2R5 130 aaKnown RBP12.67□□□□□ -0.38
HDAC9-208ENST00000417496 TOX3O15405 576 aaPredicted RBP12.67□□□□□ -0.38
HDAC9-208ENST00000417496 CSTBP04080 98 aaKnown RBP12.67□□□□□ -0.38
HDAC9-208ENST00000417496 OPRM1P35372 400 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 NPBWR1P48145 328 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 SCRN3Q0VDG4 424 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 ESX1Q8N693 406 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 DYRK2Q92630 601 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 ARL11Q969Q4 196 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 PIGQQ9BRB3 760 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 SMIM3Q9BZL3 60 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 LIME1Q9H400 295 aa12.67□□□□□ -0.38
HDAC9-208ENST00000417496 M0R135 149 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 TMEM225BP0DP42 221 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 IL32P24001 234 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 ACKR3P25106 362 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 NFYBP25208 207 aa12.66□□□□□ -0.38
HDAC9-208ENST00000417496 EIF1P41567 113 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms