RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 MAP2K3P46734 347 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 RIDAP52758 137 aaKnown RBP20.91■□□□□ 0.94
VEGFA-208ENST00000417285 ROM1Q03395 351 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 ZNF829Q3KNS6 432 aaPredicted RBP20.91■□□□□ 0.94
VEGFA-208ENST00000417285 LRRC10Q5BKY1 277 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 KRT74Q7RTS7 529 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 CMTM4Q8IZR5 234 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 TCEANCQ8N8B7 351 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 MED30Q96HR3 178 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 OR8B4Q96RC9 309 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 DNAJB11Q9UBS4 358 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 IKZF2Q9UKS7 526 aa20.91■□□□□ 0.94
VEGFA-208ENST00000417285 ZNF816-ZNF321PA0A0X1KG74 233 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 A0A1B0GVI7 797 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 MELTFP08582 738 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 RPL15P61313 204 aaKnown RBP20.9■□□□□ 0.94
VEGFA-208ENST00000417285 NXNL2Q5VZ03 156 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 C12orf73Q69YU5 71 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 AMIGO2Q86SJ2 522 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 COMMD2Q86X83 199 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 SCCPDHQ8NBX0 429 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 OR4F5Q8NH21 305 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 TMEM163Q8TC26 289 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 MNTQ99583 582 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 PBOV1Q9GZY1 135 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 BEX1Q9HBH7 125 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 COPS3Q9UNS2 423 aa20.9■□□□□ 0.94
VEGFA-208ENST00000417285 CIB2O75838 187 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 ATP6V1B1P15313 513 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 MDKP21741 143 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-208ENST00000417285 ACTR3P61158 418 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 AADACL4Q5VUY2 407 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 STUMQ69YW2 141 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 FIP1L1Q6UN15 594 aaKnown RBP20.89■□□□□ 0.93
VEGFA-208ENST00000417285 BCDIN3DQ7Z5W3 292 aaKnown RBP20.89■□□□□ 0.93
VEGFA-208ENST00000417285 GID4Q8IVV7 300 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 KIR3DL3Q8N743 410 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 NPRL2Q8WTW4 380 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 HPSE2Q8WWQ2 592 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 LRTOMTQ8WZ04 291 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 RPL3LQ92901 407 aaKnown RBP20.89■□□□□ 0.93
VEGFA-208ENST00000417285 RAB3IPQ96QF0 476 aaPredicted RBP20.89■□□□□ 0.93
VEGFA-208ENST00000417285 TTTY10Q9BZA0 68 aa20.89■□□□□ 0.93
VEGFA-208ENST00000417285 M0R129 80 aa20.88■□□□□ 0.93
VEGFA-208ENST00000417285 EPHA2P29317 976 aa20.88■□□□□ 0.93
VEGFA-208ENST00000417285 EFNB1P98172 346 aa20.88■□□□□ 0.93
VEGFA-208ENST00000417285 THAP5Q7Z6K1 395 aa20.88■□□□□ 0.93
VEGFA-208ENST00000417285 FAM216BQ8N7L0 139 aa20.88■□□□□ 0.93
VEGFA-208ENST00000417285 OR5T2Q8NGG2 359 aa20.88■□□□□ 0.93
VEGFA-208ENST00000417285 SEH1LQ96EE3 360 aa20.88■□□□□ 0.93
VEGFA-208ENST00000417285 CHIAQ9BZP6 476 aa20.88■□□□□ 0.93
VEGFA-208ENST00000417285 TNFRSF19Q9NS68 423 aa20.88■□□□□ 0.93
VEGFA-208ENST00000417285 NUFIP1Q9UHK0 495 aaKnown RBP20.88■□□□□ 0.93
VEGFA-208ENST00000417285 PRR32B1ATL7 298 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 NDUFA7O95182 113 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 OMGP23515 440 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 CXCR4P61073 352 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 RIPPLY1Q0D2K3 151 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 IKZF1Q13422 519 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 ZNF322Q6U7Q0 402 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-208ENST00000417285 METAP1DQ6UB28 335 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-208ENST00000417285 C1orf122Q6ZSJ8 110 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 VMO1Q7Z5L0 202 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 SLC35F2Q8IXU6 374 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 OR51E1Q8TCB6 317 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 DYRK2Q92630 601 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 IL4I1Q96RQ9 567 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 DCTN5Q9BTE1 182 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 WDR13Q9H1Z4 485 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 MOB1AQ9H8S9 216 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 ONECUT1Q9UBC0 465 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 CAB39Q9Y376 341 aaPredicted RBP20.87■□□□□ 0.93
VEGFA-208ENST00000417285 FAM96BQ9Y3D0 163 aa20.87■□□□□ 0.93
VEGFA-208ENST00000417285 A0A1B0GW55 424 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 NKX6-3A6NJ46 265 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 ZNF670-ZNF695F2Z2N8 137 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 DUX4L2P0CJ85 424 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 DUX4L3P0CJ86 424 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 DUX4L4P0CJ87 422 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 DUX4L5P0CJ88 424 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 DUX4L6P0CJ89 424 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 DUX4L7P0CJ90 424 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 AMY2BP19961 511 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 GPM6AP51674 278 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 RAG2P55895 527 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 GMFBP60983 142 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 GNG3P63215 75 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 ELF3P78545 371 aaPredicted RBP20.86■□□□□ 0.93
VEGFA-208ENST00000417285 CEACAM21Q3KPI0 293 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 ZBTB37Q5TC79 503 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 DUX4L9Q6RFH8 374 aaPredicted RBP20.86■□□□□ 0.93
VEGFA-208ENST00000417285 ZNF788Q6ZQV5 615 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 C8orf46Q8TAG6 207 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 ZNF671Q8TAW3 534 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 TAF15Q92804 592 aaKnown RBP eCLIP20.86■□□□□ 0.93
VEGFA-208ENST00000417285 CIB1Q99828 191 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 FGF23Q9GZV9 251 aaPredicted RBP20.86■□□□□ 0.93
VEGFA-208ENST00000417285 ADGRL4Q9HBW9 690 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 GPR84Q9NQS5 396 aa20.86■□□□□ 0.93
VEGFA-208ENST00000417285 CLN6Q9NWW5 311 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms