RNA–Protein interactions for RNA: ENST00000416717.6

SMPD4P1-201, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

BASIC

Gene SMPD4P1, Length 2,263 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-201ENST00000416717 ALKBH2Q6NS38 261 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 OR6K3Q8NGY3 331 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 KCNG3Q8TAE7 436 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 NUDCD2Q8WVJ2 157 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 PTX4Q96A99 478 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 APOBEC3DQ96AK3 386 aaPredicted RBP9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 SEH1LQ96EE3 360 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 BORCS8Q96FH0 119 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 PAPOLGQ9BWT3 736 aaKnown RBP9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 RGCCQ9H4X1 137 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 ZNF629Q9UEG4 869 aaPredicted RBP9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 ATPIF1Q9UII2 106 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 FLVCR2Q9UPI3 526 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 TLN1Q9Y490 2541 aaKnown RBP9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 TNFSF13O75888 250 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 CCNKO75909 580 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 SERPINA5P05154 406 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 OR8B8Q15620 311 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 GABRA6Q16445 453 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 NDUFA5Q16718 116 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 RPUSD3Q6P087 351 aaKnown RBP9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 RFPL4BQ6ZWI9 263 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 CXorf67Q86X51 503 aaPredicted RBP9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 CCDC54Q8NEL0 328 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 OR51T1Q8NGJ9 327 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 OR10R2Q8NGX6 335 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 CREB3L1Q96BA8 519 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 STARD4Q96DR4 205 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 SH3BGRL2Q9UJC5 107 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 ZNF391Q9UJN7 358 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 PROCRQ9UNN8 238 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 FAM215AQ9Y5M1 114 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 CHD8Q9HCK8 2581 aa9.22□□□□□ -0.93
SMPD4P1-201ENST00000416717 ZNF816-ZNF321PA0A0X1KG74 233 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 DHRS7CA6NNS2 312 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 CD3DP04234 171 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 LPLP06858 475 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 MGMTP16455 207 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 HLA-DMAP28067 261 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 RBP2P50120 134 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 CNN3Q15417 329 aaKnown RBP9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 ZNF260Q3ZCT1 412 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 PRR30Q53SZ7 412 aaPredicted RBP9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 DNM1P46Q6ZS02 220 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 FJX1Q86VR8 437 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 CDH26Q8IXH8 852 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 Q8NA96 180 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 OR4C16Q8NGL9 310 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 GPX8Q8TED1 209 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 GIMAP1Q8WWP7 306 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 SPSB4Q96A44 273 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 DACT3Q96B18 629 aaPredicted RBP9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 ZNF75AQ96N20 296 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 C7orf50Q9BRJ6 194 aaKnown RBP9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 REPIN1Q9BWE0 567 aaKnown RBP9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 OR10A4Q9H209 315 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 KCNN3Q9UGI6 736 aa9.21□□□□□ -0.93
SMPD4P1-201ENST00000416717 ANKRD34BA5PLL1 514 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 M0QYG6 137 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 HTR3BO95264 441 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 CSN2P05814 226 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 IGFBP7Q16270 282 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 PLAC9Q5JTB6 97 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 RAB12Q6IQ22 244 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 OR2W3Q7Z3T1 314 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 TRAPPC6BQ86SZ2 158 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 GVQW1Q8N7I0 195 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 BEST4Q8NFU0 473 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 OR4S1Q8NGB4 309 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 OR56B4Q8NH76 319 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 SPSB1Q96BD6 273 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 CST11Q9H112 138 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 PLSCR4Q9NRQ2 329 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 NUBP2Q9Y5Y2 271 aa9.21□□□□□ -0.94
SMPD4P1-201ENST00000416717 CADP27708 2225 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 ZZEF1O43149 2961 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 NCOR2Q9Y618 2525 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 MBD3L4A6NDZ8 208 aaPredicted RBP9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 MBD3L3A6NE82 208 aaPredicted RBP9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 MBD3L5A6NJ08 208 aaPredicted RBP9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 FIGNL2A6NMB9 653 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 LILRA1O75019 489 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 ALX3O95076 343 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 IL2RAP01589 272 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 CSF1P09603 554 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 H2AFB2P0C5Z0 115 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 ZNF14P17017 642 aaPredicted RBP9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 PRKACBP22694 351 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 GABRR1P24046 479 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 HOXC12P31275 282 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 NKX2-5P52952 324 aaPredicted RBP9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 TMPRSS3P57727 454 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 ZP1P60852 638 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 ERVS71-1P61550 626 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 PRDX4Q13162 271 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 RSU1Q15404 277 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 TBC1D28Q2M2D7 210 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 LINC00303Q3SY05 128 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 C1orf185Q5T7R7 199 aa9.2□□□□□ -0.94
SMPD4P1-201ENST00000416717 TMEM42Q69YG0 159 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms