RNA–Protein interactions for RNA: ENST00000415788.2

SGCE-202, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-202ENST00000415788 CDK5R1Q15078 307 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 SFRP4Q6FHJ7 346 aaPredicted RBP12.6□□□□□ -0.39
SGCE-202ENST00000415788 PRSS45Q7RTY3 260 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.6□□□□□ -0.39
SGCE-202ENST00000415788 MDP1Q86V88 176 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 CMTM4Q8IZR5 234 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 ZNF454Q8N9F8 522 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 GJC3Q8NFK1 279 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 OR52H1Q8NGJ2 320 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 OR6N2Q8NGY6 317 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 LINC01560Q8TB33 94 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 LGALS14Q8TCE9 139 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 FCAMRQ8WWV6 532 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 ASB13Q8WXK3 278 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 AUNIPQ9H7T9 357 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 WDR76Q9H967 626 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 BEX1Q9HBH7 125 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 NOX3Q9HBY0 568 aa12.6□□□□□ -0.39
SGCE-202ENST00000415788 UBR5O95071 2799 aaPredicted RBP12.6□□□□□ -0.39
SGCE-202ENST00000415788 A0A1W2PR80 420 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 ANKRD20A5PA0PJZ0 165 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 ARPC1BO15143 372 aaKnown RBP12.59□□□□□ -0.39
SGCE-202ENST00000415788 GPRIN2O60269 458 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 IGKV3-15P01624 115 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 THBDP07204 575 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 SPARCP09486 303 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 ZNF32P17041 273 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 MNDAP41218 407 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 GDI2P50395 445 aaKnown RBP12.59□□□□□ -0.39
SGCE-202ENST00000415788 PLP2Q04941 152 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 HLXQ14774 488 aaPredicted RBP12.59□□□□□ -0.39
SGCE-202ENST00000415788 RPL22L1Q6P5R6 122 aaKnown RBP12.59□□□□□ -0.39
SGCE-202ENST00000415788 UNQ9370/PRO34162Q6UXP9 181 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 MEX3BQ6ZN04 569 aaKnown RBP12.59□□□□□ -0.39
SGCE-202ENST00000415788 SLC16A9Q7RTY1 509 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 BVESQ8NE79 360 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 PSMG3-AS1Q96PY0 264 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 MNTQ99583 582 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 CHIAQ9BZP6 476 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 C1orf198Q9H425 327 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 LHFPL6Q9Y693 200 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 MYO18BQ8IUG5 2567 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 A1L4Q6 167 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 ZNF503-AS2A6NEH8 195 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 GOSR1O95249 250 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 SEC61A1P61619 476 aaKnown RBP12.59□□□□□ -0.39
SGCE-202ENST00000415788 CTAG1AP78358 180 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 SLC18B1Q6NT16 456 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 C22orf34Q6ZV56 151 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 WFDC8Q8IUA0 241 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 RAB40AQ8WXH6 277 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 OR2H1Q9GZK4 316 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 IFT46Q9NQC8 304 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 ATPIF1Q9UII2 106 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 GDF2Q9UK05 429 aaPredicted RBP12.59□□□□□ -0.39
SGCE-202ENST00000415788 FLVCR2Q9UPI3 526 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 TMEM14AQ9Y6G1 99 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 CACNA1CQ13936 2221 aa12.59□□□□□ -0.39
SGCE-202ENST00000415788 SELENOFO60613 162 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 IGLV1-44P01699 117 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 MRPL3P09001 348 aaKnown RBP12.58□□□□□ -0.4
SGCE-202ENST00000415788 OR2T7P0C7T2 308 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 PATE4P0C8F1 98 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 CRYGSP22914 178 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 NAA10P41227 235 aaPredicted RBP12.58□□□□□ -0.4
SGCE-202ENST00000415788 HIST1H3AP68431 136 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 PSG4Q00888 419 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 SNTB1Q13884 538 aaKnown RBP12.58□□□□□ -0.4
SGCE-202ENST00000415788 GK2Q14410 553 aaPredicted RBP12.58□□□□□ -0.4
SGCE-202ENST00000415788 HIST2H3PS2Q5TEC6 136 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 HIST2H3AQ71DI3 136 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 TMUB2Q71RG4 321 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 DPY19L4Q7Z388 723 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 PDZD9Q8IXQ8 264 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 OR2T27Q8NH04 317 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 OR52I2Q8NH67 350 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 OTOSQ8NHW6 89 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 FGFBP3Q8TAT2 258 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 THEM6Q8WUY1 208 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 CXorf58Q96LI9 332 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 CRIM1Q9NZV1 1036 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 ZNF69Q9UC07 566 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 HCFC1P51610 2035 aa12.58□□□□□ -0.4
SGCE-202ENST00000415788 A0A0B4J203 849 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 UBE2QL1A1L167 161 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 PHYHO14832 338 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 RER1O15258 196 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 SGCEO43556 437 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 NDUFB6O95139 128 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 SERPINA5P05154 406 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 COX5BP10606 129 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 PRKACAP17612 351 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 RAB3AP20336 220 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 RAD52P43351 418 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 RAB35Q15286 201 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 BEX5Q5H9J7 111 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 PABPC1L2AQ5JQF8 200 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 OTPQ5XKR4 325 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 TMEM108Q6UXF1 575 aa12.57□□□□□ -0.4
SGCE-202ENST00000415788 CFAP77Q6ZQR2 320 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms