RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 CDIPTO14735 213 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 NDUFA2O43678 99 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 LHBP01229 141 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 GATA3P23771 443 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 CSNK2BP67870 215 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 LCN2P80188 198 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 MRPL28Q13084 256 aaKnown RBP21.18■□□□□ 0.98
CPNE1-207ENST00000414664 CEP78Q5JTW2 689 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 TMEM244Q5VVB8 128 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 PLCXD3Q63HM9 321 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 WDR82Q6UXN9 313 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 PRSS35Q8N3Z0 413 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 OR4M2Q8NGB6 313 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 OR8B3Q8NGG8 313 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 OR8B2Q96RD0 313 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 PLEKHA1Q9HB21 404 aa21.18■□□□□ 0.98
CPNE1-207ENST00000414664 FGF20Q9NP95 211 aaPredicted RBP21.18■□□□□ 0.98
CPNE1-207ENST00000414664 PPIAL4CA0A0B4J2A2 164 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 ZNF732B4DXR9 585 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 FAM157CP0CG43 387 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 DCKP27707 260 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 CD80P33681 288 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 GPM6AP51674 278 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 CCR9P51686 369 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 TMEM42Q69YG0 159 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 SFRP4Q6FHJ7 346 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-207ENST00000414664 FAHD2BQ6P2I3 314 aaPredicted RBP21.17■□□□□ 0.98
CPNE1-207ENST00000414664 C19orf18Q8NEA5 215 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 OR10Z1Q8NGY1 313 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 HAVCR2Q8TDQ0 301 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 PELI1Q96FA3 418 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 FAHD2AQ96GK7 314 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 JAM3Q9BX67 310 aa21.17■□□□□ 0.98
CPNE1-207ENST00000414664 C3orf80F5H4A9 247 aa21.16■□□□□ 0.98
CPNE1-207ENST00000414664 KIR3DL2P43630 455 aa21.16■□□□□ 0.98
CPNE1-207ENST00000414664 DCAF12L2Q5VW00 463 aa21.16■□□□□ 0.98
CPNE1-207ENST00000414664 TEX29Q8N6K0 151 aa21.16■□□□□ 0.98
CPNE1-207ENST00000414664 SCCPDHQ8NBX0 429 aa21.16■□□□□ 0.98
CPNE1-207ENST00000414664 RPL3LQ92901 407 aaKnown RBP21.16■□□□□ 0.98
CPNE1-207ENST00000414664 RNF166Q96A37 237 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-207ENST00000414664 C10orf35Q96D05 121 aa21.16■□□□□ 0.98
CPNE1-207ENST00000414664 SSBP3Q9BWW4 388 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-207ENST00000414664 METTL17Q9H7H0 456 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-207ENST00000414664 FRRS1LQ9P0K9 344 aa21.16■□□□□ 0.98
CPNE1-207ENST00000414664 POLR3KQ9Y2Y1 108 aaPredicted RBP21.16■□□□□ 0.98
CPNE1-207ENST00000414664 ANK3Q12955 4377 aaKnown RBP21.16■□□□□ 0.98
CPNE1-207ENST00000414664 LOC107986453A0A1B0GWG9 222 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 A8MXK9 166 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 H0YJX3 145 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 J3QLI3 93 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 IFNA2P01563 188 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 RPSAP08865 295 aaKnown RBP21.15■□□□□ 0.98
CPNE1-207ENST00000414664 MUC1P15941 1255 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-207ENST00000414664 SRD5A1P18405 259 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 ZFP36P26651 326 aaKnown RBP21.15■□□□□ 0.98
CPNE1-207ENST00000414664 GNB2P62879 340 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 MED21Q13503 144 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 MICBQ29980 383 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 TEX36Q5VZQ5 186 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 IL17RELQ6ZVW7 336 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 TFAP2CQ92754 450 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 FGF23Q9GZV9 251 aaPredicted RBP21.15■□□□□ 0.98
CPNE1-207ENST00000414664 VCX3BQ9H321 246 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 OR51I2Q9H344 312 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 OR5V1Q9UGF6 321 aa21.15■□□□□ 0.98
CPNE1-207ENST00000414664 SERPINA3P01011 423 aa21.14■□□□□ 0.97
CPNE1-207ENST00000414664 ISG15P05161 165 aa21.14■□□□□ 0.97
CPNE1-207ENST00000414664 SRP14P37108 136 aaKnown RBP21.14■□□□□ 0.97
CPNE1-207ENST00000414664 GBX2P52951 348 aaPredicted RBP21.14■□□□□ 0.97
CPNE1-207ENST00000414664 SEC61A1P61619 476 aaKnown RBP21.14■□□□□ 0.97
CPNE1-207ENST00000414664 ALKBH1Q13686 389 aaKnown RBP21.14■□□□□ 0.97
CPNE1-207ENST00000414664 ZNF671Q8TAW3 534 aa21.14■□□□□ 0.97
CPNE1-207ENST00000414664 ZNF649Q9BS31 505 aa21.14■□□□□ 0.97
CPNE1-207ENST00000414664 ISG20L2Q9H9L3 353 aaKnown RBP21.14■□□□□ 0.97
CPNE1-207ENST00000414664 GPR173Q9NS66 373 aa21.14■□□□□ 0.97
CPNE1-207ENST00000414664 ANKRD61A6NGH8 418 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 SRRM5B3KS81 715 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 GATBO75879 557 aaKnown RBP21.13■□□□□ 0.97
CPNE1-207ENST00000414664 GNAO1P09471 354 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 EGR1P18146 543 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 MYL12AP19105 171 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 PITPNBP48739 271 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 NANOS3P60323 173 aaKnown RBP21.13■□□□□ 0.97
CPNE1-207ENST00000414664 HOXA4Q00056 320 aaPredicted RBP21.13■□□□□ 0.97
CPNE1-207ENST00000414664 KRTAP21-3Q3LHN1 58 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 LYPD2Q6UXB3 125 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 TMPRSS11AQ6ZMR5 421 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 ZNF573Q86YE8 665 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 RDH10Q8IZV5 341 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 NRG4Q8WWG1 115 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 TECTBQ96PL2 329 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 CHCHD3Q9NX63 227 aaKnown RBP21.13■□□□□ 0.97
CPNE1-207ENST00000414664 ERVK-18Q9QC07 812 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 CLN8Q9UBY8 286 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 DIMT1Q9UNQ2 313 aaKnown RBP21.13■□□□□ 0.97
CPNE1-207ENST00000414664 SLC7A11Q9UPY5 501 aa21.13■□□□□ 0.97
CPNE1-207ENST00000414664 EXOSC1Q9Y3B2 195 aaKnown RBP21.13■□□□□ 0.97
CPNE1-207ENST00000414664 A6NIN4 97 aa21.12■□□□□ 0.97
CPNE1-207ENST00000414664 H3BSH0 61 aa21.12■□□□□ 0.97
CPNE1-207ENST00000414664 PHF1O43189 567 aaPredicted RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms