RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 DDOQ99489 341 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 PUS1Q9Y606 427 aaKnown RBP eCLIP15.39■□□□□ 0.05
PHRF1-202ENST00000413872 FOCADQ5VW36 1801 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 POM121CA8CG34 1229 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 OR4E1P0C645 316 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 CTLA4P16410 223 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 LYG2Q86SG7 212 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 C2orf50Q96LR7 162 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 ICAM5Q9UMF0 924 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 CCL27Q9Y4X3 112 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 ARFGEF1Q9Y6D6 1849 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 NUDT19A8MXV4 375 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 FOXS1O43638 330 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 ZIC2O95409 532 aaPredicted RBP15.39■□□□□ 0.05
PHRF1-202ENST00000413872 NGFP01138 241 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 C1QBP02746 253 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 CA6P23280 308 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 FCARP24071 287 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 CXXC4Q9H2H0 198 aa15.39■□□□□ 0.05
PHRF1-202ENST00000413872 LRP3O75074 770 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 CLN5O75503 358 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 PTGFRP43088 359 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 ZFP82Q8N141 532 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 ASB5Q8WWX0 329 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 GAL3ST2Q9H3Q3 398 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 PURGQ9UJV8 347 aaKnown RBP15.38■□□□□ 0.05
PHRF1-202ENST00000413872 CDONQ4KMG0 1287 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 PLA1AQ53H76 456 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 OR6S1Q8NH40 331 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 CST2P09228 141 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 ZBTB25P24278 435 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 MAGEA5P43359 124 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 HABP2Q14520 560 aaPredicted RBP15.38■□□□□ 0.05
PHRF1-202ENST00000413872 TESK1Q15569 626 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 C10orf35Q96D05 121 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 ZNF75AQ96N20 296 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 ZNF275Q9NSD4 429 aaPredicted RBP15.38■□□□□ 0.05
PHRF1-202ENST00000413872 A0A0B4J203 849 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 GPR37O15354 613 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 GREM1O60565 184 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 ZFPL1O95159 310 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 HOXD4P09016 255 aaPredicted RBP15.38■□□□□ 0.05
PHRF1-202ENST00000413872 H2AFB1P0C5Y9 115 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 NPBWR1P48145 328 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 RAB7AP51149 207 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 SLC25A35Q3KQZ1 300 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 TXN2Q99757 166 aa15.38■□□□□ 0.05
PHRF1-202ENST00000413872 PEBP1P30086 187 aaKnown RBP15.37■□□□□ 0.05
PHRF1-202ENST00000413872 OR2M7Q8NG81 312 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 AUNIPQ9H7T9 357 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 SPAG17Q6Q759 2223 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 HIST2H3PS2Q5TEC6 136 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 THSD4Q6ZMP0 1018 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 SFT2D1Q8WV19 159 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 DNASE2BQ8WZ79 361 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 CLDN23Q96B33 292 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 SAMD10Q9BYL1 202 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 PPIHO43447 177 aaKnown RBP15.37■□□□□ 0.05
PHRF1-202ENST00000413872 ANKRD34CP0C6C1 535 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 GLI4P10075 376 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 MPGP29372 298 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 SKP2Q13309 424 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 ACOT6Q3I5F7 207 aaPredicted RBP15.37■□□□□ 0.05
PHRF1-202ENST00000413872 SAV1Q9H4B6 383 aaPredicted RBP15.37■□□□□ 0.05
PHRF1-202ENST00000413872 hADV38S2A0JD32 116 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 NUPL2O15504 423 aaKnown RBP15.37■□□□□ 0.05
PHRF1-202ENST00000413872 OR10J4P0C629 311 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 LIMS3P0CW19 117 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 LIMS4P0CW20 117 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 LIFP15018 202 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 OXA1LQ15070 435 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 POM121L2Q96KW2 1035 aa15.37■□□□□ 0.05
PHRF1-202ENST00000413872 HRASP01112 189 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 SP1P08047 785 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 CCL3P10147 92 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 GABRB1P18505 474 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 UBE2G1P62253 170 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 TMEM128Q5BJH2 165 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 FAM27D1Q5T7N8 215 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 OR2M3Q8NG83 312 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 CMBLQ96DG6 245 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 GINS3Q9BRX5 216 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 RPS10-NUDT3A0A1W2PQS6 291 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 FTH1P19P0C7X4 201 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 CT45A10P0DMU9 189 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 RAB4AP20338 218 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 CLDN20P56880 219 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 OR4S1Q8NGB4 309 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 OR4C16Q8NGL9 310 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 ZNF638Q14966 1978 aaKnown RBP15.36■□□□□ 0.05
PHRF1-202ENST00000413872 UBE2MP61081 183 aaKnown RBP15.36■□□□□ 0.05
PHRF1-202ENST00000413872 TRBV5-3A0A0A0MS03 114 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 NGFRP08138 427 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 ELLP55199 621 aaPredicted RBP15.36■□□□□ 0.05
PHRF1-202ENST00000413872 TMPRSS7Q7RTY8 843 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 MOB3BQ86TA1 216 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 PTP4A1Q93096 173 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 MARC2Q969Z3 335 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 ORAI1Q96D31 301 aa15.36■□□□□ 0.05
PHRF1-202ENST00000413872 RHNO1Q9BSD3 238 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms