RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 PIGTQ969N2 578 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 NELFAQ9H3P2 528 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.13□□□□□ -0.31
TTC39A-208ENST00000413473 ZNF629Q9UEG4 869 aaPredicted RBP13.13□□□□□ -0.31
TTC39A-208ENST00000413473 TP53I11O14683 189 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 DHRS3O75911 302 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 THBS4P35443 961 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 CCDC74BQ96LY2 380 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 GNRHR2Q96P88 292 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 AQP10Q96PS8 301 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 RBM24Q9BX46 236 aaKnown RBP13.13□□□□□ -0.31
TTC39A-208ENST00000413473 ACKR4Q9NPB9 350 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 ZNF701Q9NV72 531 aaPredicted RBP13.13□□□□□ -0.31
TTC39A-208ENST00000413473 PIGLQ9Y2B2 252 aa13.13□□□□□ -0.31
TTC39A-208ENST00000413473 IGKV1D-8A0A087WSZ0 117 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 ZNF705EA8MWA4 302 aaPredicted RBP13.12□□□□□ -0.31
TTC39A-208ENST00000413473 F8W036 122 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 GDF9O60383 454 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 SFTPBP07988 381 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 DBHP09172 617 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 FKBP2P26885 142 aaKnown RBP13.12□□□□□ -0.31
TTC39A-208ENST00000413473 S100A10P60903 97 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 BLOC1S1P78537 153 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 IL15RAQ13261 267 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 STK11Q15831 433 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 LDLRAD3Q86YD5 345 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 FOXRED2Q8IWF2 684 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 POC1AQ8NBT0 407 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 OR4A4PQ8NGN8 299 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 EMG1Q92979 244 aaKnown RBP13.12□□□□□ -0.31
TTC39A-208ENST00000413473 NECAB3Q96P71 396 aaPredicted RBP13.12□□□□□ -0.31
TTC39A-208ENST00000413473 TMEM231Q9H6L2 316 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 V9GYS6 101 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 LY6G6EA0A0G2JKS1 128 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 A0A0U1RQV5 110 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 SERPINE3A8MV23 424 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 ONECUT2O95948 504 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 CSTBP04080 98 aaKnown RBP13.12□□□□□ -0.31
TTC39A-208ENST00000413473 SCRN3Q0VDG4 424 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 MRPL14Q6P1L8 145 aaKnown RBP13.12□□□□□ -0.31
TTC39A-208ENST00000413473 C6orf201Q7Z4U5 140 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 OR5T2Q8NGG2 359 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 UCN2Q96RP3 112 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 TLNRD1Q9H1K6 362 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 OCIAD1Q9NX40 245 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 U3KQA8 63 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 FIGNL2A6NMB9 653 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 SIGLEC6O43699 453 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 PNLIPP16233 465 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 MST1LQ2TV78 715 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 RHBDD1Q8TEB9 315 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 PP6455Q8WZ26 134 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 HAS2Q92819 552 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 NABP1Q96AH0 204 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 CHST5Q9GZS9 411 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 TREM1Q9NP99 234 aa13.12□□□□□ -0.31
TTC39A-208ENST00000413473 VPS13AQ96RL7 3174 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 PMS2P1A4D2B8 440 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 NR2C1P13056 603 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 CPT2P23786 658 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 GABRR1P24046 479 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 PTGER4P35408 488 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 STARD6P59095 220 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 C10orf128Q5T292 105 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 SLC16A14Q7RTX9 510 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 ESX1Q8N693 406 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 TM2D1Q9BX74 207 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 SLC5A7Q9GZV3 580 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 MCTS1Q9ULC4 181 aaKnown RBP13.11□□□□□ -0.31
TTC39A-208ENST00000413473 G3V3Y1 287 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 DHHO43323 396 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 F12P00748 615 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-208ENST00000413473 CD63P08962 238 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 PCOLCEQ15113 449 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 TDHQ8IZJ6 230 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 TMEM54Q969K7 222 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 PIGQQ9BRB3 760 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 HDHD3Q9BSH5 251 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-208ENST00000413473 HRH4Q9H3N8 390 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 UBE2ZQ9H832 354 aaPredicted RBP13.11□□□□□ -0.31
TTC39A-208ENST00000413473 FSCN3Q9NQT6 498 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 MMP26Q9NRE1 261 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 PLEKHJ1Q9NW61 149 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 PLEK2Q9NYT0 353 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 LPAR3Q9UBY5 353 aa13.11□□□□□ -0.31
TTC39A-208ENST00000413473 C14orf166Q9Y224 244 aaKnown RBP13.11□□□□□ -0.31
TTC39A-208ENST00000413473 DHRS7CA6NNS2 312 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 NPIPA2E9PIF3 369 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 NPIPA3F8WFD2 350 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 M0R135 149 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 EPHA8P29322 1005 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-208ENST00000413473 EIF3IQ13347 325 aaKnown RBP13.1□□□□□ -0.31
TTC39A-208ENST00000413473 RAET1LQ5VY80 246 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 RPL7L1Q6DKI1 246 aaKnown RBP13.1□□□□□ -0.31
TTC39A-208ENST00000413473 H3F3CQ6NXT2 135 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 SEMA6DQ8NFY4 1073 aa13.1□□□□□ -0.31
TTC39A-208ENST00000413473 ZNF775Q96BV0 537 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-208ENST00000413473 ZNF837Q96EG3 531 aaPredicted RBP13.1□□□□□ -0.31
TTC39A-208ENST00000413473 ZNF799Q96GE5 643 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms