RNA–Protein interactions for RNA: ENST00000409796.5

LYSMD4-204, Transcript of LysM domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD4, Length 2,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-204ENST00000409796 RBMS3Q6XE24 437 aaKnown RBP13.34□□□□□ -0.27
LYSMD4-204ENST00000409796 FAM89BQ8N5H3 189 aa13.34□□□□□ -0.27
LYSMD4-204ENST00000409796 RXFP4Q8TDU9 374 aa13.34□□□□□ -0.27
LYSMD4-204ENST00000409796 OR6C1Q96RD1 312 aa13.34□□□□□ -0.27
LYSMD4-204ENST00000409796 SLC26A1Q9H2B4 701 aa13.34□□□□□ -0.27
LYSMD4-204ENST00000409796 OR2S2Q9NQN1 319 aa13.34□□□□□ -0.27
LYSMD4-204ENST00000409796 EHFQ9NZC4 300 aa13.34□□□□□ -0.27
LYSMD4-204ENST00000409796 ZNF726A6NNF4 738 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 RPS2P15880 293 aaKnown RBP13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 KISS1Q15726 138 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 DRAM2Q6UX65 266 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 CPEB2Q7Z5Q1 589 aaKnown RBP13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 PGAM5Q96HS1 289 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 SCGB3A2Q96PL1 93 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 B3GALT1Q9Y5Z6 326 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 FOXI3A8MTJ6 420 aaPredicted RBP13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 ZFAND5O76080 213 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 HPNP05981 417 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 PTGFRP43088 359 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 SLC6A9P48067 706 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 GRB2P62993 217 aaKnown RBP13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 C10orf91Q5T1B1 145 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 AVPI1Q5T686 147 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 DTX1Q86Y01 620 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 POC1AQ8NBT0 407 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 C2orf50Q96LR7 162 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 CNTNAP3BQ96NU0 1288 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 AQP10Q96PS8 301 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 TLNRD1Q9H1K6 362 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 TREM1Q9NP99 234 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 MMP26Q9NRE1 261 aa13.33□□□□□ -0.28
LYSMD4-204ENST00000409796 ZNF705EA8MWA4 302 aaPredicted RBP13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 EIF1BO60739 113 aaKnown RBP13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 NDUFS6O75380 124 aaKnown RBP13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 HOXB5P09067 269 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 PRF1P14222 555 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 BLVRBP30043 206 aaPredicted RBP13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 EIF1P41567 113 aaKnown RBP13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 NPBWR1P48145 328 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 CLDN17P56750 224 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 FAM189A2Q15884 450 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 PNLDC1Q8NA58 520 aaKnown RBP13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 ZNF251Q9BRH9 671 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 MTCH2Q9Y6C9 303 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 STMND1H3BQB6 276 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 SCRG1O75711 98 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 CSTBP04080 98 aaKnown RBP13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 SMIM6P0DI80 62 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 FOSL1P15407 271 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 SERPINA2P20848 420 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 ECH1Q13011 328 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 PECRQ9BY49 303 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 GSKIPQ9P0R6 139 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 CARHSP1Q9Y2V2 147 aaKnown RBP13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 ARID1AO14497 2285 aa13.32□□□□□ -0.28
LYSMD4-204ENST00000409796 AQP7P3A6NL99 342 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 TAS2R46P59540 309 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 S100A10P60903 97 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 SNRPEP62304 92 aaKnown RBP13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 IL15RAQ13261 267 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 COL19A1Q14993 1142 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 LCN10Q6JVE6 187 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 H3F3CQ6NXT2 135 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 SPAG16Q8N0X2 631 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 WDSUB1Q8N9V3 476 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 SLC5A7Q9GZV3 580 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 ZFP57Q9NU63 452 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 NUDT19A8MXV4 375 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 ZNF806P0C7X5 589 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 ACY1Q03154 408 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 PJVKQ0ZLH3 352 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 UBE2V2Q15819 145 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 RHBDD1Q8TEB9 315 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 INTS12Q96CB8 462 aaKnown RBP13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 ZNF160Q9HCG1 818 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 LPAR3Q9UBY5 353 aa13.31□□□□□ -0.28
LYSMD4-204ENST00000409796 PMS2P1A4D2B8 440 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 OR5H15A6NDH6 313 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 F5H5K5 113 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 BCAT2O15382 392 aaPredicted RBP13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 MBTPS2O43462 519 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 KNG1P01042 644 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 IGLV3-1P01715 115 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 PTGER4P35408 488 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 ZNF239Q16600 458 aaKnown RBP13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 RSPO4Q2I0M5 234 aaPredicted RBP13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 PHYHD1Q5SRE7 291 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 PRAMEF20Q5VT98 475 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 ADAMTS17Q8TE56 1095 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 RASL10BQ96S79 203 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 HRH4Q9H3N8 390 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 FAM96BQ9Y3D0 163 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 IGKV1D-8A0A087WSZ0 117 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 SFTPBP07988 381 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 FCGR2AP12318 317 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 CBR1P16152 277 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 FAHP16930 419 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 CTSSP25774 331 aa13.3□□□□□ -0.28
LYSMD4-204ENST00000409796 THBS4P35443 961 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms