RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 FMODQ06828 376 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 RETREG3Q86VR2 466 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 ADGRG7Q96K78 797 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 TUBA4BQ9H853 241 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 ATP1B1P05026 303 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 PSMB2P49721 201 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 COL13A1Q5TAT6 717 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 CYHR1Q6ZMK1 362 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 MOGAT3Q86VF5 341 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 SPACA9Q96E40 222 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 ACTR3CQ9C0K3 210 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 NAA50Q9GZZ1 169 aaKnown RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 SIRT3Q9NTG7 399 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 PLAUP00749 431 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 NGFP01138 241 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 FABP4P15090 132 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 CNR1P21554 472 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 P2RX4Q99571 388 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 PLCH1Q4KWH8 1693 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 KIR2DS1A0A191URI9 304 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 ZNF701M0R085 212 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 FZD6O60353 706 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 RHBDL1O75783 438 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 KIR2DS4P43632 304 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 SRPXP78539 464 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 KIR2DS1Q14954 304 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 NKAIN3Q8N8D7 197 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 NOXO1Q8NFA2 376 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 RXFP4Q8TDU9 374 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 CCL19Q99731 98 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 VN1R1Q9GZP7 353 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 SLC25A32Q9H2D1 315 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 PRDM7Q9NQW5 492 aa7.55□□□□□ -1.2
SCN9A-203ENST00000409672 TP53BP1Q12888 1972 aaPredicted RBP7.55□□□□□ -1.2
SCN9A-203ENST00000409672 FRG2CA6NGY1 282 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 G3V3Q6 166 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 ACTL6AO96019 429 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 HTN3P15516 51 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 FABP9Q0Z7S8 132 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 OR2D2Q9H210 308 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 H3BVH4 76 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 TAS2R60P59551 318 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 SNRPNP63162 240 aaKnown RBP7.54□□□□□ -1.2
SCN9A-203ENST00000409672 FOXO1Q12778 655 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 SIGLECL1Q8N7X8 197 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 PELI1Q96FA3 418 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 PRDM6Q9NQX0 595 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 IGHV1OR15-9A0A0B4J2B8 117 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 PYCARD-AS1I3L0S3 204 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 PPP3CBP16298 524 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 IL11RAQ14626 422 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 ETV3LQ6ZN32 361 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 NCCRP1Q6ZVX7 275 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-203ENST00000409672 CDH26Q8IXH8 852 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 OR4F17Q8NGA8 305 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 FAM210AQ96ND0 272 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 B3GALT5Q9Y2C3 310 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 CEACAM5P06731 702 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 OR5H8P0DN80 308 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 FZD2Q14332 565 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 HLXQ14774 488 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-203ENST00000409672 PAQR6Q6TCH4 344 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 ANKRD37Q7Z713 158 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 LACC1Q8IV20 430 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 OR2L13Q8N349 312 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 SEH1LQ96EE3 360 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 TIMP4Q99727 224 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 TXLNGYQ9BZA5 131 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 LAT2Q9GZY6 243 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 MAP1BP46821 2468 aaKnown RBP7.54□□□□□ -1.2
SCN9A-203ENST00000409672 A0A1W2PPE3 182 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 ADRA2AP08913 450 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 COL9A1P20849 921 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 VWA1Q6PCB0 445 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 MARCH1Q8TCQ1 289 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 CABLES2Q9BTV7 478 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 C20orf27Q9GZN8 174 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 PARP11Q9NR21 331 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 A0A1B0GTH9 108 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 PMCHP20382 165 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 STPG1Q5TH74 334 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 TEAD3Q99594 435 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 AMMECR1Q9Y4X0 333 aaPredicted RBP7.54□□□□□ -1.2
SCN9A-203ENST00000409672 SERPINE3A8MV23 424 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 NID1P14543 1247 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 CR2P20023 1033 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 CLDN10P78369 228 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 MUC15Q8N387 334 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 PRAF2O60831 178 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 PXT1Q8NFP0 134 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 OR52B4Q8NGK2 314 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 OR52I2Q8NH67 350 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 DCTN5Q9BTE1 182 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 FLVCR2Q9UPI3 526 aa7.54□□□□□ -1.2
SCN9A-203ENST00000409672 RCL1Q9Y2P8 373 aaKnown RBP7.54□□□□□ -1.2
SCN9A-203ENST00000409672 LSM2Q9Y333 95 aaKnown RBP7.54□□□□□ -1.2
SCN9A-203ENST00000409672 TMEM30CPA0ZSE6 113 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 RER1O15258 196 aa7.53□□□□□ -1.2
SCN9A-203ENST00000409672 SPI1P17947 270 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms