RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 RBP2P50120 134 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 RTP5Q14D33 572 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 OR8B8Q15620 311 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 PNLIPRP3Q17RR3 467 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 LHFPL2Q6ZUX7 228 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 ASCC1Q8N9N2 400 aaKnown RBP17.96■□□□□ 0.47
USP39-203ENST00000409470 POFUT1Q9H488 388 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 GP6Q9HCN6 339 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 TMEM82A0PJX8 343 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 PLATP00750 562 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 MPGP29372 298 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 BLVRBP30043 206 aaPredicted RBP17.96■□□□□ 0.47
USP39-203ENST00000409470 CXADRP78310 365 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 PLP2Q04941 152 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 CAMK2BQ13554 666 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 ARFRP1Q13795 201 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 C4orf46Q504U0 113 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 FBXW9Q5XUX1 488 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 TMEM42Q69YG0 159 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 COLCA1Q6ZS62 124 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 PIGCQ92535 297 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 SPSB4Q96A44 273 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 PRRT1Q99946 306 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 METTL9Q9H1A3 318 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 IRF2BPLQ9H1B7 796 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 DLL4Q9NR61 685 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 SLC7A11Q9UPY5 501 aa17.96■□□□□ 0.47
USP39-203ENST00000409470 ZNF816-ZNF321PA0A0X1KG74 233 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 MFNGO00587 321 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 ZNHIT1O43257 154 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 CPT2P23786 658 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 HRH1P35367 487 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 MOB3CQ70IA8 216 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 TMED4Q7Z7H5 227 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 CCDC107Q8WV48 283 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 GMPPAQ96IJ6 420 aaPredicted RBP17.95■□□□□ 0.46
USP39-203ENST00000409470 CHIAQ9BZP6 476 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 CHST6Q9GZX3 395 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 HSPB11Q9Y547 144 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 KCNMB2Q9Y691 235 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 FAM186AA6NE01 2351 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 ARHGAP21Q5T5U3 1957 aa17.95■□□□□ 0.46
USP39-203ENST00000409470 IGKV1-27A0A075B6S5 117 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 SPRY1O43609 319 aaPredicted RBP17.94■□□□□ 0.46
USP39-203ENST00000409470 ANGPTL7O43827 346 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 RAD51DO75771 328 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 RSU1Q15404 277 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 Q5BKY6 102 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 PLCXD3Q63HM9 321 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 SEZ6L2Q6UXD5 910 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 NLRC3Q7RTR2 1065 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 SPICQ8N5J4 248 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 ZNF431Q8TF32 576 aaPredicted RBP17.94■□□□□ 0.46
USP39-203ENST00000409470 TM2D1Q9BX74 207 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 KCNN3Q9UGI6 736 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 MGAT4AQ9UM21 535 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 NPTNQ9Y639 398 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 HTR3BO95264 441 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 CSTBP04080 98 aaKnown RBP17.94■□□□□ 0.46
USP39-203ENST00000409470 IFNA6P05013 189 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 TBPP20226 339 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 HIKESHIQ53FT3 197 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 OR1K1Q8NGR3 316 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 OR4K15Q8NH41 348 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 TRIB1Q96RU8 372 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 SLA2Q9H6Q3 261 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 SLC2A8Q9NY64 477 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 PTTG3PQ9NZH4 202 aa17.94■□□□□ 0.46
USP39-203ENST00000409470 OR14I1A6ND48 311 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 IL18BPO95998 194 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 PMP2P02689 132 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 OR3A2P47893 321 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 FUT6P51993 359 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 SNRPD2P62316 118 aaKnown RBP17.93■□□□□ 0.46
USP39-203ENST00000409470 MALLQ13021 153 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 UXS1Q8NBZ7 420 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 OR13C8Q8NGS7 320 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 OR2T35Q8NGX2 323 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 APOBEC3DQ96AK3 386 aaPredicted RBP17.93■□□□□ 0.46
USP39-203ENST00000409470 CEACAM4O75871 244 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 GABRR1P24046 479 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 DNASE1P24855 282 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 ATP1B3P54709 279 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 ZMYND11Q15326 602 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 LAMTOR1Q6IAA8 161 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 MUC20Q8N307 709 aaPredicted RBP17.93■□□□□ 0.46
USP39-203ENST00000409470 NAXEQ8NCW5 288 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 NANOS1Q8WY41 292 aaKnown RBP17.93■□□□□ 0.46
USP39-203ENST00000409470 TECTBQ96PL2 329 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 PECRQ9BY49 303 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 ALX4Q9H161 411 aaPredicted RBP17.93■□□□□ 0.46
USP39-203ENST00000409470 CA10Q9NS85 328 aa17.93■□□□□ 0.46
USP39-203ENST00000409470 MUC6Q6W4X9 2439 aa17.92■□□□□ 0.46
USP39-203ENST00000409470 FOXI3A8MTJ6 420 aaPredicted RBP17.92■□□□□ 0.46
USP39-203ENST00000409470 AKR7A2O43488 359 aa17.92■□□□□ 0.46
USP39-203ENST00000409470 SS18L1O75177 396 aaPredicted RBP17.92■□□□□ 0.46
USP39-203ENST00000409470 CBX5P45973 191 aa17.92■□□□□ 0.46
USP39-203ENST00000409470 GK2Q14410 553 aaPredicted RBP17.92■□□□□ 0.46
USP39-203ENST00000409470 ATPAF1Q5TC12 328 aaPredicted RBP17.92■□□□□ 0.46
USP39-203ENST00000409470 ZBTB37Q5TC79 503 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms