RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 PLEKHA1Q9HB21 404 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 CHCHD3Q9NX63 227 aaKnown RBP16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 PCDHB10Q9UN67 800 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 PPIAL4AQ9Y536 164 aa16.66■□□□□ 0.26
PDLIM2-207ENST00000409417 C2CD3Q4AC94 2353 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 hCG_1807616A0A1W2PRN6 198 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 OR5B21A6NL26 309 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 FAM157AC9JC47 383 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 E9PI62 339 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 H3BSH0 61 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 LHBP01229 141 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 CFHR2P36980 270 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 VHLP40337 213 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 PLCXD3Q63HM9 321 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 KCTD8Q6ZWB6 473 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 MOB3CQ70IA8 216 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 C10orf35Q96D05 121 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 CLEC2DQ9UHP7 191 aa16.65■□□□□ 0.26
PDLIM2-207ENST00000409417 NAV3Q8IVL0 2385 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 A6NIN4 97 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 ZNF732B4DXR9 585 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 CDIPTO14735 213 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 RPSAP08865 295 aaKnown RBP16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 CPT2P23786 658 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 ZNF404Q494X3 552 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 CCDC58Q4VC31 144 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 DMRTC1Q5HYR2 192 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 OR2G6Q5TZ20 316 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 WDR82Q6UXN9 313 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 AHSA2Q719I0 299 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 ZNF676Q8N7Q3 588 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 SCCPDHQ8NBX0 429 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 FKBP14Q9NWM8 211 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 HHLA2Q9UM44 414 aa16.64■□□□□ 0.25
PDLIM2-207ENST00000409417 ANKRD61A6NGH8 418 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 TMEM212A6NML5 194 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 INAFM1C9JVW0 142 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 ZFPL1O95159 310 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 CCDC159P0C7I6 412 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 STX19Q8N4C7 294 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 GCSAMQ8N6F7 178 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 OR52N1Q8NH53 320 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 RPL3LQ92901 407 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 TMEM246Q9BRR3 403 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 CHST5Q9GZS9 411 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 OR51I2Q9H344 312 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 PATZ1Q9HBE1 687 aaKnown RBP16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 GPR173Q9NS66 373 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 BABAM2Q9NXR7 383 aa16.63■□□□□ 0.25
PDLIM2-207ENST00000409417 CEACAM18A8MTB9 384 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 LGALS8O00214 317 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 LMX1BO60663 402 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 MSMBP08118 114 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 C21orf33P30042 268 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 GTF2A1P52655 376 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 HOXA4Q00056 320 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 RPL22L1Q6P5R6 122 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 BOLLQ8N9W6 283 aaKnown RBP16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 OR51F2Q8NH61 342 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 LRRC29Q8WV35 223 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 PP6455Q8WZ26 134 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 METTL17Q9H7H0 456 aaPredicted RBP16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 TRIM36Q9NQ86 728 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 KCNS2Q9ULS6 477 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 RAB26Q9ULW5 256 aa16.62■□□□□ 0.25
PDLIM2-207ENST00000409417 TRBV2A0A0J9YWF9 115 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 PQLC2LA1A4F0 135 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 SLC1A7O00341 560 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 SERPINA3P01011 423 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 DVL1P1P54792 670 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 KCNJ8Q15842 424 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 SFRP4Q6FHJ7 346 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 ZNF485Q8NCK3 441 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 C19orf18Q8NEA5 215 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 DEFB108BQ8NET1 73 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 OR10Z1Q8NGY1 313 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 OR10AC1Q8NH08 325 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 OR5AK2Q8NH90 309 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 TECTBQ96PL2 329 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 PDCD1LG2Q9BQ51 273 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 COMMD4Q9H0A8 199 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 LPAR2Q9HBW0 351 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 TMEM160Q9NX00 188 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 SCN3BQ9NY72 215 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 MIOXQ9UGB7 285 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 TRAV38-1A0A0B4J264 116 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 OOEPA6NGQ2 149 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 F5H0A9 414 aaPredicted RBP16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 C3orf80F5H4A9 247 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 PLPP2O43688 288 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 GATBO75879 557 aaKnown RBP16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 WNT2P09544 360 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 UBE2V2Q15819 145 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 XAF1Q6GPH4 301 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 DCDC5Q6ZRR9 648 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 GLCCI1Q86VQ1 547 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 ZNF573Q86YE8 665 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 OR51A4Q8NGJ6 313 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 RPS4Y2Q8TD47 263 aa16.61■□□□□ 0.25
PDLIM2-207ENST00000409417 GATAD2BQ8WXI9 593 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms