RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 OR2AG1Q9H205 316 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 SRMSQ9H3Y6 488 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 ASB8Q9H765 288 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 LHX9Q9NQ69 397 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 FAM212BQ9NTI7 297 aaPredicted RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 AHSPQ9NZD4 102 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 OR52A1Q9UKL2 312 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 MEMO1Q9Y316 297 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 STARD10Q9Y365 291 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 AK6Q9Y3D8 172 aaKnown RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 STRAPQ9Y3F4 350 aaKnown RBP4.81□□□□□ -1.64
CLK1-202ENST00000409403 CSAG2Q9Y5P2 127 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 CRYBG3Q68DQ2 2970 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 HIVEP1P15822 2718 aa4.81□□□□□ -1.64
CLK1-202ENST00000409403 PCSK5Q92824 1860 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 A0A0B4J2A0 478 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SLC5A10A0PJK1 596 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 B4DEV8 164 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 PPP5D1E7EU14 171 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 NDUFS8O00217 210 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 PROP1O75360 226 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 PLAUP00749 431 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CST4P01036 141 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 RPN2P04844 631 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR2T7P0C7T2 308 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 FABP4P15090 132 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ST6GAL1P15907 406 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 EDNRAP25101 427 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 IL2RGP31785 369 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CCKARP32238 428 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 MPIP34949 423 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 RPL4P36578 427 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 ACVR1BP36896 505 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SIRPAP78324 504 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 LTBQ06643 244 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 IQCJQ1A5X6 159 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ISXQ2M1V0 245 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 LRRC37A5PQ49AS3 106 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ZNF766Q5HY98 468 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 GGNBP1Q5YKI7 109 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CYB5R2Q6BCY4 276 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 FAAP20Q6NZ36 180 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 PLBD1Q6P4A8 553 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 TNFAIP8L2Q6P589 184 aaPredicted RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 PRSS54Q6PEW0 395 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 MBOAT2Q6ZWT7 520 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 MTSS1LQ765P7 747 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SLC16A14Q7RTX9 510 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SCD5Q86SK9 330 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 PIP4P1Q86T03 277 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SLC25A42Q86VD7 318 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 THOC6Q86W42 341 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 TMEM173Q86WV6 379 aaPredicted RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 ZNF573Q86YE8 665 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 LRRC18Q8N456 261 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 PLPP5Q8NEB5 264 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 C17orf47Q8NEP4 570 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 BBS1Q8NFJ9 593 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SEMA6DQ8NFY4 1073 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR5T1Q8NG75 326 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR2T27Q8NH04 317 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR4C6Q8NH72 309 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR5AK2Q8NH90 309 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 C16orf78Q8WTQ4 265 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 HPSE2Q8WWQ2 592 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ROBO4Q8WZ75 1007 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SMPDL3AQ92484 453 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ISOC2Q96AB3 205 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 MOAP1Q96BY2 351 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 TM4SF18Q96CE8 201 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 RAB39BQ96DA2 213 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SLC35G5Q96KT7 338 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 YPEL4Q96NS1 127 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 DERL3Q96Q80 235 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 EFCAB11Q9BUY7 163 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR8D2Q9GZM6 311 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 RHBGQ9H310 441 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR51B6Q9H340 312 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 RIMS4Q9H426 269 aaPredicted RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 DPEP2Q9H4A9 486 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 FBXO44Q9H4M3 255 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 TAF9BQ9HBM6 251 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SPACA1Q9HBV2 294 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CHST11Q9NPF2 352 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 ZDHHC4Q9NPG8 344 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CMC2Q9NRP2 79 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 CYTL1Q9NRR1 136 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SLC2A8Q9NY64 477 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR14J1Q9UGF5 321 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 OR5V1Q9UGF6 321 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SHPKQ9UHJ6 478 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 KCNG2Q9UJ96 466 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 SLC22A14Q9Y267 594 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 MRPS18CQ9Y3D5 142 aaKnown RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 CELSR2Q9HCU4 2923 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 PI4KAP42356 2102 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 MTORP42345 2549 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 DOCK4Q8N1I0 1966 aa4.8□□□□□ -1.64
CLK1-202ENST00000409403 A0A0A6YYC8 382 aaPredicted RBP4.8□□□□□ -1.64
CLK1-202ENST00000409403 TRBV2A0A0J9YWF9 115 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms