RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 LINC00471Q8N535 108 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 OR5T2Q8NGG2 359 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 OR52J3Q8NH60 311 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 RPS4Y2Q8TD47 263 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 GNPDA2Q8TDQ7 276 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 PHF21AQ96BD5 680 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 RCN3Q96D15 328 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 PGAM5Q96HS1 289 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 MAP6Q96JE9 813 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 RAB3IPQ96QF0 476 aaPredicted RBP6.31□□□□□ -1.4
LSM5-202ENST00000409292 C1orf21Q9H246 121 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 EFCAB1Q9HAE3 211 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 PNRC2Q9NPJ4 139 aaKnown RBP6.31□□□□□ -1.4
LSM5-202ENST00000409292 SAR1AQ9NR31 198 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 SNTG1Q9NSN8 517 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 NLKQ9UBE8 527 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 CD300AQ9UGN4 299 aa6.31□□□□□ -1.4
LSM5-202ENST00000409292 TRBV4-1A0A0J9YWV2 114 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 OR6C68A6NDL8 312 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 TVP23AA6NH52 213 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 OR2AT4A6NND4 320 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 SIGLEC5O15389 551 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 CCDC22O60826 627 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 ACAA1P09110 424 aaPredicted RBP6.3□□□□□ -1.4
LSM5-202ENST00000409292 RRM2P31350 389 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 PYCR1P32322 319 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 ARHGDIBP52566 201 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 OR12D2P58182 307 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 CSNK2BP67870 215 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 FAM3AP98173 230 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 HOXA4Q00056 320 aaPredicted RBP6.3□□□□□ -1.4
LSM5-202ENST00000409292 EIF2B1Q14232 305 aaKnown RBP6.3□□□□□ -1.4
LSM5-202ENST00000409292 CNN3Q15417 329 aaKnown RBP6.3□□□□□ -1.4
LSM5-202ENST00000409292 KLHL22Q53GT1 634 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 SAMD4BQ5PRF9 694 aaKnown RBP6.3□□□□□ -1.4
LSM5-202ENST00000409292 SLC35F1Q5T1Q4 408 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 ZBTB37Q5TC79 503 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 FOXB2Q5VYV0 432 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 FAM57BQ71RH2 274 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 SHFQ7M4L6 423 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 SLC15A3Q8IY34 581 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 LYG1Q8N1E2 194 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 PNKDQ8N490 385 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 Q8N7P7 452 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 OR13D1Q8NGV5 346 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 OR6K6Q8NGW6 343 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 FAM81AQ8TBF8 368 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 TNFRSF14Q92956 283 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 ITFG2Q969R8 447 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 SPSB4Q96A44 273 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 RCC1LQ96I51 464 aaKnown RBP6.3□□□□□ -1.4
LSM5-202ENST00000409292 AKR1E2Q96JD6 320 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 RNF170Q96K19 258 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 WWC2-AS2Q96NR7 200 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 MMP28Q9H239 520 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 FN3KQ9H479 309 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 IL1RAPQ9NPH3 570 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 CMTM6Q9NX76 183 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 USE1Q9NZ43 259 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 NDUFAF4Q9P032 175 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 BAIAP2Q9UQB8 552 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 LRP12Q9Y561 859 aa6.3□□□□□ -1.4
LSM5-202ENST00000409292 A0A1B0GW55 424 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 RIIAD1A6NNX1 92 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 ZNF593O00488 134 aaPredicted RBP6.29□□□□□ -1.4
LSM5-202ENST00000409292 H2BFMP0C1H6 154 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 DUX4L2P0CJ85 424 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 DUX4L3P0CJ86 424 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 DUX4L4P0CJ87 422 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 DUX4L5P0CJ88 424 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 DUX4L6P0CJ89 424 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 DUX4L7P0CJ90 424 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 VDAC2P45880 294 aaPredicted RBP6.29□□□□□ -1.4
LSM5-202ENST00000409292 BMXP51813 675 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 RPL31P62899 125 aaKnown RBP6.29□□□□□ -1.4
LSM5-202ENST00000409292 PRB3Q04118 309 aaPredicted RBP6.29□□□□□ -1.4
LSM5-202ENST00000409292 TSPAN31Q12999 210 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 PRDX4Q13162 271 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 DGUOKQ16854 277 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 SMIM21Q3B7S5 101 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 TEX30Q5JUR7 227 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 GLYATQ6IB77 296 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 DUX4L9Q6RFH8 374 aaPredicted RBP6.29□□□□□ -1.4
LSM5-202ENST00000409292 THAP5Q7Z6K1 395 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 C11orf53Q8IXP5 236 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 ZDHHC23Q8IYP9 409 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 OR5K1Q8NHB7 308 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 PPP1R35Q8TAP8 253 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 PIGCQ92535 297 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 RORBQ92753 470 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 RPL3LQ92901 407 aaKnown RBP6.29□□□□□ -1.4
LSM5-202ENST00000409292 SGK3Q96BR1 496 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 GAFA1Q96PS6 74 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 TLNRD1Q9H1K6 362 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 VIPAS39Q9H9C1 493 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 TBC1D23Q9NUY8 699 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 MRPL22Q9NWU5 206 aaKnown RBP6.29□□□□□ -1.4
LSM5-202ENST00000409292 RASL12Q9NYN1 266 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 DUX4Q9UBX2 424 aa6.29□□□□□ -1.4
LSM5-202ENST00000409292 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms