RNA–Protein interactions for RNA: ENST00000401468.7

VPS53-203, Transcript of VPS53, GARP complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS53, Length 1,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS53-203ENST00000401468 MTRF1O75570 445 aaKnown RBP7.79□□□□□ -1.16
VPS53-203ENST00000401468 CELP19835 753 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 GALP22466 123 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 MED22Q15528 200 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 SSX1Q16384 188 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 YIF1BQ5BJH7 314 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 OR2T2Q6IF00 324 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 CD200R1LQ6Q8B3 271 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 CLEC2AQ6UVW9 174 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 UNQ9370/PRO34162Q6UXP9 181 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 MRPL21Q7Z2W9 205 aaKnown RBP7.79□□□□□ -1.16
VPS53-203ENST00000401468 PHC2Q8IXK0 858 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 PARP16Q8N5Y8 322 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 OR56B2PQ8NGI1 322 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 OR51A4Q8NGJ6 313 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 FAM168AQ92567 244 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 GHSRQ92847 366 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 DIRC2Q96SL1 478 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 SYT3Q9BQG1 590 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 SLC22A4Q9H015 551 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 COMMD4Q9H0A8 199 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 TPK1Q9H3S4 243 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 NDUFB11Q9NX14 153 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 ZDHHC8Q9ULC8 765 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 HHLA2Q9UM44 414 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 SVEP1Q4LDE5 3571 aa7.79□□□□□ -1.16
VPS53-203ENST00000401468 TRBV5-7A0A0A0MS05 114 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 ZNF816-ZNF321PA0A0X1KG74 233 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 A0A1B0GVI7 797 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 LRP5LA4QPB2 252 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 ZSCAN5BA6NJL1 495 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 C17orf100A8MU93 164 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 M0R233 179 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 MLNRO43193 412 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 SYT7O43581 403 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 CD5LO43866 347 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 GMDSO60547 372 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 GPX5O75715 221 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 INMTO95050 263 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 PSMA1P25786 263 aaKnown RBP7.78□□□□□ -1.16
VPS53-203ENST00000401468 GABRA5P31644 462 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 IL2RGP31785 369 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 SELENOVP59797 346 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 SNRPD2P62316 118 aaKnown RBP7.78□□□□□ -1.16
VPS53-203ENST00000401468 RIPPLY1Q0D2K3 151 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 TRAM1Q15629 374 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 TMEM249Q2WGJ8 235 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 ZMAT1Q5H9K5 638 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 FAM76BQ5HYJ3 339 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 FAM209AQ5JX71 171 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 ASPHD2Q6ICH7 369 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 KCTD8Q6ZWB6 473 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 UTS2BQ765I0 119 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 RDH10Q8IZV5 341 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 MS4A15Q8N5U1 240 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 CELF2-AS1Q8N7Q2 184 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 ZNF676Q8N7Q3 588 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 SEMA6DQ8NFY4 1073 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 OR10AC1Q8NH08 325 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 GPR148Q8TDV2 347 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 PP6455Q8WZ26 134 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 THRSPQ92748 146 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 UFD1Q92890 307 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 MRPS26Q9BYN8 205 aaKnown RBP7.78□□□□□ -1.16
VPS53-203ENST00000401468 MS4A5Q9H3V2 200 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 NARFLQ9H6Q4 476 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 ABCB9Q9NP78 766 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 ZNF275Q9NSD4 429 aaPredicted RBP7.78□□□□□ -1.16
VPS53-203ENST00000401468 TAAR3PQ9P1P4 343 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 DUSP13Q9UII6 198 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 GPR160Q9UJ42 338 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 GTF2A1LQ9UNN4 478 aa7.78□□□□□ -1.16
VPS53-203ENST00000401468 IGHV4-61A0A0C4DH41 118 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 GGT3PA6NGU5 568 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 TIMM8AO60220 97 aaPredicted RBP7.77□□□□□ -1.17
VPS53-203ENST00000401468 EIF4EBP3O60516 100 aaPredicted RBP7.77□□□□□ -1.17
VPS53-203ENST00000401468 IGHV1-46P01743 117 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 TFAP2AP05549 437 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 IGHV4-31P0DP07 118 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 CD37P11049 281 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 IGFBP3P17936 291 aaPredicted RBP7.77□□□□□ -1.17
VPS53-203ENST00000401468 TGFBR2P37173 567 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 CD200P41217 278 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 ALDH3B2P48448 385 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 ZNF81P51508 661 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 GFOD2Q3B7J2 385 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 PCGF3Q3KNV8 242 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 Q499Y3 187 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 ARMCX4Q5H9R4 360 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 LIPKQ5VXJ0 399 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 TMEM91Q6ZNR0 172 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 FTMTQ8N4E7 242 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 ZFP41Q8N8Y5 198 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 OR13G1Q8NGZ3 307 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 C10orf105Q8TEF2 133 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 PHYHIPQ92561 330 aa7.77□□□□□ -1.17
VPS53-203ENST00000401468 GTF3AQ92664 365 aaKnown RBP7.77□□□□□ -1.17
VPS53-203ENST00000401468 ADAT3Q96EY9 351 aaPredicted RBP7.77□□□□□ -1.17
VPS53-203ENST00000401468 FAM71F1Q96KD3 344 aaPredicted RBP7.77□□□□□ -1.17
VPS53-203ENST00000401468 TECTBQ96PL2 329 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms