RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 FAM74A1Q5RGS3 127 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 C1QL3Q5VWW1 255 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 ADAM5Q6NVV9 412 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 OR52N4Q8NGI2 321 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 EDARADDQ8WWZ3 215 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 COMMD5Q9GZQ3 224 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 PSENENQ9NZ42 101 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 OR5V1Q9UGF6 321 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 STRAPQ9Y3F4 350 aaKnown RBP16.23■□□□□ 0.19
COL18A1-204ENST00000400337 TOX3O15405 576 aaPredicted RBP16.23■□□□□ 0.19
COL18A1-204ENST00000400337 RPL11P62913 178 aaKnown RBP16.23■□□□□ 0.19
COL18A1-204ENST00000400337 AARDQ4LEZ3 155 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 PABPC1L2AQ5JQF8 200 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 UQCC2Q9BRT2 126 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 ADAT1Q9BUB4 502 aaKnown RBP16.23■□□□□ 0.19
COL18A1-204ENST00000400337 LHX9Q9NQ69 397 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 TRPM6Q9BX84 2022 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 GLDNQ6ZMI3 551 aaPredicted RBP16.23■□□□□ 0.19
COL18A1-204ENST00000400337 UBALD1Q8TB05 177 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF230Q9UIE0 474 aaPredicted RBP16.23■□□□□ 0.19
COL18A1-204ENST00000400337 GALNSP34059 522 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 PDZK1IP1Q13113 114 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 ETFDHQ16134 617 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 PINX1Q96BK5 328 aaKnown RBP16.23■□□□□ 0.19
COL18A1-204ENST00000400337 SLC17A5Q9NRA2 495 aa16.23■□□□□ 0.19
COL18A1-204ENST00000400337 CLEC3BP05452 202 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 MESP2Q0VG99 397 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 CDONQ4KMG0 1287 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 CDX2Q99626 313 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-204ENST00000400337 ADAM19Q9H013 955 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 OR5H15A6NDH6 313 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 SRD5A2P31213 254 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 PTGFRP43088 359 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF816Q0VGE8 651 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-204ENST00000400337 C8orf82Q6P1X6 216 aaPredicted RBP16.22■□□□□ 0.19
COL18A1-204ENST00000400337 SLC38A6Q8IZM9 456 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 SMRP1Q8NCR6 262 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 WDFY2Q96P53 400 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 CFHR5Q9BXR6 569 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 NUDT19A8MXV4 375 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 CYR61O00622 381 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 FABP1P07148 127 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 PATE4P0C8F1 98 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 OR2Z1Q8NG97 314 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 NUBPLQ8TB37 319 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 LHX4Q969G2 390 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF75AQ96N20 296 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 KIAA1456Q9P272 454 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 FBXO17Q96EF6 278 aa16.22■□□□□ 0.19
COL18A1-204ENST00000400337 UMAD1C9J7I0 102 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 PPP1R2P9O14990 202 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 CCL4P13236 92 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 SSTP61278 116 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 DEFA6Q01524 100 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 B3GNTL1Q67FW5 361 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 PLPPR2Q96GM1 343 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 RASL10BQ96S79 203 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 A0A1W2PQF6 199 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 H3BP45 60 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 K7EQM0 130 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 UBE2IP63279 158 aaKnown RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 SP6Q3SY56 376 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 OR2W3Q7Z3T1 314 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 ZAR1Q86SH2 424 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 SP7Q8TDD2 431 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 DCTN6O00399 190 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 TNFSF14O43557 240 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 NDUFB6O95139 128 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 ADRB1P08588 477 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 HIST1H1DP16402 221 aaKnown RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 CA6P23280 308 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 FLI1Q01543 452 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 TAGLNQ01995 201 aaKnown RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 GPR31O00270 319 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 IL5P05113 134 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 ADH4P08319 380 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 TRIP6Q15654 476 aaKnown RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 HES3Q5TGS1 186 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 SPINK14Q6IE38 97 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 WDR74Q6RFH5 385 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 TSEN54Q7Z6J9 526 aaKnown RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 TCTE3Q8IZS6 198 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 IER2Q9BTL4 223 aa16.21■□□□□ 0.19
COL18A1-204ENST00000400337 ZNF275Q9NSD4 429 aaPredicted RBP16.21■□□□□ 0.19
COL18A1-204ENST00000400337 GPR37O15354 613 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 CTAG2O75638 210 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 TGM1P22735 817 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 RPUSD3Q6P087 351 aaKnown RBP16.2■□□□□ 0.18
COL18A1-204ENST00000400337 D2HGDHQ8N465 521 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 RBM38Q9H0Z9 239 aaKnown RBP16.2■□□□□ 0.18
COL18A1-204ENST00000400337 HIST2H3AQ71DI3 136 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 OR5G3P0C626 314 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 CCL2P13500 99 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 ZNF83P51522 516 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 KIAA0141Q14154 515 aaPredicted RBP16.2■□□□□ 0.18
COL18A1-204ENST00000400337 PLA1AQ53H76 456 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 OR8U1Q8NH10 309 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 ST8SIA2Q92186 375 aa16.2■□□□□ 0.18
COL18A1-204ENST00000400337 CIB3Q96Q77 187 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms