RNA–Protein interactions for RNA: ENST00000400053.8

PTPRM-202, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRM, Length 5,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-202ENST00000400053 MOB3AQ96BX8 217 aa7.99□□□□□ -1.13
PTPRM-202ENST00000400053 MED29Q9NX70 200 aa7.99□□□□□ -1.13
PTPRM-202ENST00000400053 TBC1D29Q9UFV1 150 aa7.99□□□□□ -1.13
PTPRM-202ENST00000400053 QDPRP09417 244 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 GUK1Q16774 197 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SMIM21Q3B7S5 101 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 TMEM240Q5SV17 173 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 ETFRF1Q6IPR1 90 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 ANKRD16Q6P6B7 361 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 KIRREL2Q6UWL6 708 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 TCTEX1D1Q8N7M0 179 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 OR4C5Q8NGB2 326 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 TMEM56Q96MV1 263 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 OCIAD1Q9NX40 245 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SLC5A6Q9Y289 635 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SLC17A4Q9Y2C5 497 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 MED19A0JLT2 244 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-202ENST00000400053 OR2T8A6NH00 312 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 HS3ST1O14792 307 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 CST7O76096 145 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 GOSR1O95249 250 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 WISP3O95389 354 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-202ENST00000400053 HPP00738 406 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 IGHV3-9P01782 118 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 CCL11P51671 97 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SEZ6L2Q6UXD5 910 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 ABI3BPQ7Z7G0 1075 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 DUSP18Q8NEJ0 188 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 GPR32P1Q8NGA4 272 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 OR4D10Q8NGI6 311 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 PATE1Q8WXA2 126 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 ATP5SQ99766 215 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 NXF2Q9GZY0 626 aaKnown RBP7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SIT1Q9Y3P8 196 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 ZNF320A2RRD8 509 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 FAM24AA6NFZ4 105 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 CD27P26842 260 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SLC6A1P30531 599 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SELENOPP49908 381 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SULT1A2P50226 295 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 PIGPP57054 158 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 PCBP3P57721 371 aaKnown RBP7.98□□□□□ -1.13
PTPRM-202ENST00000400053 DHRS2Q13268 280 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 MIDNQ504T8 468 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 OR2B11Q5JQS5 317 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 UQCC3Q6UW78 93 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 C17orf78Q8N4C9 275 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 TMEM37Q8WXS4 190 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 ZG16BQ96DA0 208 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 PELI1Q96FA3 418 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 IGHV3-64DA0A0J9YX35 117 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 M0R135 149 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SLC17A2O00624 439 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 OR2J3O76001 311 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 SLC25A4P12235 298 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 PMP22Q01453 160 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 EGR3Q06889 387 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 COX19Q49B96 90 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 NKAIN1Q4KMZ8 207 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 C6orf15Q6UXA7 325 aaPredicted RBP7.98□□□□□ -1.13
PTPRM-202ENST00000400053 ETFBKMTQ8IXQ9 262 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 C17orf47Q8NEP4 570 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 ZNF799Q96GE5 643 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 PSENENQ9NZ42 101 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 CYB5R1Q9UHQ9 305 aa7.98□□□□□ -1.13
PTPRM-202ENST00000400053 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 M0R143 59 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 CRYBA1P05813 215 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 IAPPP10997 89 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 SLC25A6P12236 298 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 TNFRSF1AP19438 455 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 FGF7P21781 194 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 ASCL1P50553 236 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 PPP1CBP62140 327 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 B3GNTL1Q67FW5 361 aaPredicted RBP7.97□□□□□ -1.13
PTPRM-202ENST00000400053 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 CBLN2Q8IUK8 224 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 BCORP1Q8N888 145 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 RDH5Q92781 318 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 RSRP1Q9BUV0 290 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 VAMP8Q9BV40 100 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 DCAF16Q9NXF7 216 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 ASXL3Q9C0F0 2248 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 ZNF716A6NP11 495 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 ZNF785A8K8V0 405 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 LINC01387J3KSC0 135 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 PLA2G10O15496 165 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 ZFPL1O95159 310 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 NRASP01111 189 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 ANKRD34CP0C6C1 535 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 RAG2P55895 527 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 YBX1P67809 324 aaKnown RBP7.97□□□□□ -1.13
PTPRM-202ENST00000400053 SHBQ15464 509 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 IQCJQ1A5X6 159 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 SP6Q3SY56 376 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 TMEM128Q5BJH2 165 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 SLC37A2Q8TED4 501 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 NEIL1Q96FI4 390 aaPredicted RBP7.97□□□□□ -1.13
PTPRM-202ENST00000400053 APC2O95996 2303 aa7.97□□□□□ -1.13
PTPRM-202ENST00000400053 IDSB3KWA1 339 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms