RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 HMGN3Q15651 99 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 SMIM7Q9BQ49 75 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 KLK4Q9Y5K2 254 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 CHRM2P08172 466 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 ZNF416Q9BWM5 594 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 SLC26A1Q9H2B4 701 aa12.34□□□□□ -0.43
VAPA-202ENST00000400000 BMPR1BO00238 502 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 FGF8P55075 233 aaPredicted RBP12.33□□□□□ -0.44
VAPA-202ENST00000400000 ZNF260Q3ZCT1 412 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 CCDC190Q86UF4 302 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 FAM219AQ8IW50 185 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 OR1B1Q8NGR6 318 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 B9D1Q9UPM9 204 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 A0A087WUJ7 227 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 SNRPCP09234 159 aaKnown RBP12.33□□□□□ -0.44
VAPA-202ENST00000400000 ZNF26P17031 533 aaPredicted RBP12.33□□□□□ -0.44
VAPA-202ENST00000400000 OR1F12Q8NHA8 337 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 ARHGDIGQ99819 225 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 ZNF768Q9H5H4 540 aaKnown RBP12.33□□□□□ -0.44
VAPA-202ENST00000400000 POMT2Q9UKY4 750 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 SPTY2D1-AS1A0A0U1RR47 76 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 HMX2A2RU54 273 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 TIGITQ495A1 244 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 EXTL1Q92935 676 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 OR2A14Q96R47 310 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 ANKRD36CQ5JPF3 1778 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 MBTPS2O43462 519 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 DHRS4L2Q6PKH6 230 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 SLC25A21Q9BQT8 299 aaPredicted RBP12.33□□□□□ -0.44
VAPA-202ENST00000400000 ANKUB1A6NFN9 424 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 TO15178 435 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 NME1P15531 152 aaKnown RBP12.33□□□□□ -0.44
VAPA-202ENST00000400000 OR2A1Q8NGT9 310 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 KPTNQ9Y664 436 aa12.33□□□□□ -0.44
VAPA-202ENST00000400000 K7EQS6 105 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 VAMP5O95183 116 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 AVPR2P30518 371 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 LRRC29Q8WV35 223 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 IP6K3Q96PC2 410 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 GON7Q9BXV9 100 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 FBXO34Q9NWN3 711 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 PCDHGA9Q9Y5G4 932 aaKnown RBP12.32□□□□□ -0.44
VAPA-202ENST00000400000 TMEM200CA6NKL6 621 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 HPP00738 406 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 CTXN2P0C2S0 81 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 ATF1P18846 271 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 M1APQ8TC57 530 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 PELI1Q96FA3 418 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 NIT2Q9NQR4 276 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 LMO7DNF2Z398 122 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 RPL13AP40429 203 aaKnown RBP12.32□□□□□ -0.44
VAPA-202ENST00000400000 EGR3Q06889 387 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 ANKRD37Q7Z713 158 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 SCARB1Q8WTV0 552 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 CT55Q8WUE5 264 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 PTPMT1Q8WUK0 201 aaPredicted RBP12.32□□□□□ -0.44
VAPA-202ENST00000400000 A0A1B0GUL6 1792 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 NGFP01138 241 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 ZNF117Q03924 483 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 RNASEKQ6P5S7 137 aaKnown RBP12.32□□□□□ -0.44
VAPA-202ENST00000400000 BTF3L4Q96K17 158 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 JAM3Q9BX67 310 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 ERRFI1Q9UJM3 462 aaPredicted RBP12.32□□□□□ -0.44
VAPA-202ENST00000400000 CD40P25942 277 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 G6PCP35575 357 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 TNXAQ16473 311 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 FFAR4Q5NUL3 377 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 C6orf201Q7Z4U5 140 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 OR10D3Q8NH80 312 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 ST8SIA1Q92185 356 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 LURAP1Q96LR2 239 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 TCEAL7Q9BRU2 100 aa12.32□□□□□ -0.44
VAPA-202ENST00000400000 ADAM20O43506 726 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 SPNP16150 400 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 SLC37A1P57057 533 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 B4GALNT1Q00973 533 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 TM4SF19Q96DZ7 209 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 OR2D2Q9H210 308 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 N4BP2Q86UW6 1770 aaPredicted RBP12.31□□□□□ -0.44
VAPA-202ENST00000400000 TMIGD3P0DMS9 266 aaPredicted RBP12.31□□□□□ -0.44
VAPA-202ENST00000400000 XKR7Q5GH72 579 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 CRISPLD2Q9H0B8 497 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 GAR1Q9NY12 217 aaKnown RBP12.31□□□□□ -0.44
VAPA-202ENST00000400000 CCL4P13236 92 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 FAM3AP98173 230 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 PWWP2BQ6NUJ5 590 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 TIPARPQ7Z3E1 657 aaKnown RBP12.31□□□□□ -0.44
VAPA-202ENST00000400000 PLPP6Q8IY26 295 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 COMMD1Q8N668 190 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 AAMDCQ9H7C9 122 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 OR2M5A3KFT3 312 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 NAAAQ02083 359 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 ZNF425Q6IV72 752 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 RTN4IP1Q8WWV3 396 aaPredicted RBP12.31□□□□□ -0.44
VAPA-202ENST00000400000 CHODLQ9H9P2 273 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 CPN1P15169 458 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 PNLIPRP2P54317 469 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 EMC4Q5J8M3 183 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 ZNF793Q6ZN11 406 aa12.31□□□□□ -0.44
VAPA-202ENST00000400000 SFTPA2Q8IWL1 248 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms